10 20 30 40
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------age---
A Archaeoglobus_fulgidus ----------------------------------------
A Pyrococcus_abyssi ------------------------mimgkks---sdp---
============================================================================
A METHANOCOCCUS_VOLTAE -------------------------------sdn------
A Methanococcus_jannaschii itfiyffgniiyylpiysyinnykfmlmviimdd------
A Methanococcus_maripaludis -------------------------------adv------
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------------------------sne---
A Desulfurococcus_amylolyticus ----------------------------------seeket
A Sulfolobus_acidocaldarius ----------------------------------------
A Sulfolobus_tokodaii ----------------------------------ndm---
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN ----------------------------------------
* S_CEREVISIAE ----------------------------------sqv---
* Apis_mellifera ----------------------------------------
* Aspergillus_flavus ----------------------------------------
* Aspergillus_fumigatus ----------------------------------------
* Bovine ----------------------------------------
* C_elegans -------------saqasrqkk--sdqeqra---------
* Candida_albicans ----------------------tqteie-qv---dlh-ee
* Candida_glabrata ----------------------------------tev---
* Canis_lupus ----------------------------------------
* Chaetomium_globosum ----------------------------------------
* Coccidioides_immitis ----------------------------------------
* Coprinus_cinereus ----------------------------------------
* Cricetulus_griseus ----------------------------------------
* Cryptococcus_neoformans ----------------------------------------
* Danio_rerio ----------------------------------------
* Debaryomyces_hansenii -------------tet------------------------
* D_melanogaster ----------------------------------------
* D_pseudoobscura ----------------------------------------
* Emericella_nidulans ----------------------------------------
* Encephalitozoon_cuniculi ----------------------------------------
* Eremothecium_gossypii -sqvqehiiqdphssqynihatgaserqgss---eht-dg
* Chicken ----------------------------------------
* Gibberella_zeae ----------------------------------------
* Kluyveromyces_lactis ----------------------------------------
* Mouse ----------------------------------------
* Neurospora_crassa ----------------sn----------------------
* Rabbit ----------------------------------------
* Pichia_angusta ---------------tqvaevnhitsneqqg---s-----
* Rat ----------------------------------------
* Schizosaccharomyces_pombe --------------adtev-emqvsaadtnn---nen-gq
* Strongylocentrotus_purpuratus ----------------------------------------
* Tetraodon_nigroviridis ----------------------------------------
* Tribolium_castaneum ----------------------------------------
* Ustilago_maydis ----------------------------------------
* X_tropicalis ----------------------------------------
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ----------------------------------------
* X_laevis-RA51B ----------------------------------------
Cryptosporidium_hominis --------------stin----------------------
Cryptosporidium_parvum --------------stin----------------------
Dictyostelium_discoideum -------------asrqrqe--------------------
Entamoeba_histolytica ---------sakqiqrgseeelleseenlke---ke----
Leishmania_donovani qtrskakgrrgrpsarpsdevevvesqpqea---lqn-ee
Leishmania_tropica qtrskakgrrgrpsarpseevevvesqpqev---lqn-ee
Plasmodium_berghei -------------------------pamksa---n-----
Plasmodium_falciparum ----------------------------------------
Tetrahymena_thermophila ----------------------------------------
Theileria_annulata -------------------------ssd------------
Theileria_parva -------------------------ssd------------
Trypanosoma_brucei ------------ntrtknkkrtkeviedevh---did-dt
Trypanosoma_cruzi -------ntrskrgkrkgveevevheiants---pdp-va
P Arabidopsis_thaliana ----------------------------------------
P Oryza_sativa ----------------------------------------
P Maize-R51A1 ----------------------------------------
P Maize-R51A2 ----------------------------------------
============================================================================
B E_COLI ----------------------------------ai----
B MYCOBACTERIUM_SMEGMATIS ----------------------------------aqq---
B MYCOBACTERIUM_TUBERCULOSIS ----------------------------------tq----
B Acinetobacter_calcoaceticus ----------------------------------------
B Actinobacillus_pleuropneumoniae -----asdnkkaqkntvtk---------------qi----
B Actinobacillus_succinogenes -----atpndktk---------------------ps----
B Actinomyces_bovis ----------------------------------apq---
B Azotobacter_vinelandii ----------------------------------------
B Bacillus_clausii ----------------------------------------
B Bacillus_halodurans ----------------------------------------
B Bacillus_licheniformis ----------------------------------------
B Bacillus_megaterium ----------------------------------------
B Bacillus_subtilis ----------------------------------------
B Bordetella_pertussis -----ddktsk-----------------------aa----
B Burkholderia_fungorum -----eeskkgsa---------------------gl----
B Chromobacterium_violaceum -----------------------------------a----
B Clostridium_acetobutylicum ----------------------------------------
B Clostridium_thermocellum -----------------------------------i----
B Colwellia_psychrerythraea ----------------------------------------
B Corynebacterium_efficiens -----atkkttkaa--------------------pk----
B Desulfotalea_psychrophila -----v----------------------------gat---
B Enterococcus_faecalis ----------------------------------------
B Haemophilus_ducreyi -----aadkkaqkntatk----------------qi----
B Haemophilus_influenzae ----------------------------------at----
B Histophilus_somni ----------------------------------at----
B Kineococcus_radiotolerans ----------------------------------pa----
B Leifsonia_xyli -----------------------------------ps---
B Mannheimia_succiniciproducens ----------------------------------at----
B Nitrosomonas_europaea ----------------------------------------
B Nitrosomonas_eutropha ----------------------------------------
B Oceanobacillus_iheyensis ----------------------------------------
B Pasteurella_multocida ----------------------------------at----
B Photobacterium_profundum ----------------------------------------
B Photorhabdus_luminescens ----------------------------------ai----
B Proteus_mirabilis ----------------------------------ai----
B Pseudomonas_cepacia ----------------------------------------
B Pseudomonas_pseudomallei -----eeskkgs----------------------gl----
B Shewanella_amazonensis -----------------------------------ki---
B Shewanella_putrefaciens ----------------------------------kv----
B Streptomyces_avermitilis -----------------------------------a----
B Vibrio_alginolyticus ----------------------------------------
B Vibrio_angustum ----------------------------------------
B Vibrio_cholerae ----------------------------------------
B Vibrio_fischeri ----------------------------------------
B Vibrio_parahaemolyticus ----------------------------------------
B Vibrio_splendidus ----------------------------------------
B Vibrio_vulnificus ----------------------------------------
B Yersinia_enterocolitica ----------------------------------ai----
B Cupriavidus_metallidurans-Q1LR74 -----ddkkaga----------------------gv----
B Cupriavidus_metallidurans-RECA -----ddkkaga----------------------gv----
B Erwinia_carotovora-RECA -----------------------------------ai---
B Erwinia_carotovora-RECA_ERWCT -----------------------------------ai---
B Listeria_monocytogenes-RECA ----------------------------------------
B Listeria_monocytogenes-RECA_LISMF ----------------------------------------
B Neisseria_gonorrhoeae-RECA ----------------------------------------
B Neisseria_gonorrhoeae-RECA_VAR ----------------------------------------
B Salmonella_typhi-RECA ----------------------------------ai----
B Salmonella_typhi-RECA_SALPA ----------------------------------ai----
B Streptomyces_coelicolor-RECA -----------------------------------a----
B Streptomyces_coelicolor-RECA_STRL -----------------------------------a----
B Xylella_fastidiosa-RECA ----------------------------------------
B Xylella_fastidiosa-RECA_XYLFT ----------------------------------------
B Yersinia_pestis-RECA ----------------------------------ai----
B Yersinia_pestis-RECA_YERPS ----------------------------------ai----
B Mycobacterium_tuberculosis-RECA ----------------------------------tq----
B Mycobacterium_tuberculosis-RECA_M ----------------------------------tq----
B Neisseria_meningitidis-RECA ----------------------------------------
B Neisseria_meningitidis-RECA_NEIMA ----------------------------------------
B Neisseria_meningitidis-RECA_VAR ----------------------------------------
B Xanthomonas_vasicola-RECA_XANAC -----svspavsacaihrryispipksltri---tqm---
B Xanthomonas_vasicola-RECA_XANCP -----svspavsacaihrryispipksltri---tqm---
B Xanthomonas_vasicola-YP_201580 -----svspavsacaihrryispipksltri---tqm---
B Pseudomonas_aeruginosa-Q48F94 ----------------------------------------
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS ----------------------------------gsh---
B Deinococcus_geothermalis ----------------------------------------
B Thermus_aquaticus-RECA ----------------------------------------
B Thermus_aquaticus-RECA_THET2 ----------------------------------------
B Thermus_aquaticus-RECA_THET8 ----------------------------------------
B Thermus_aquaticus-RECA_THETH ----------------------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
50 60 70 80
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS -----evke--idefeelgf-e-pateetpkkkkke----
A Archaeoglobus_fulgidus -------------------s-e-esneet-----------
A Pyrococcus_abyssi -----avve--indvdelel-e-vgeevtskkkkke----
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS -veqk-----k-----------------------------
A Desulfurococcus_amylolyticus ikers-----s-----------------------------
A Sulfolobus_acidocaldarius -sndg-----k-----------------------------
A Sulfolobus_tokodaii -ssdg-----k-----------------------------
A Aeropyrum_pernix-RADA -gedk-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 -gedk-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 -gedk-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 -gedk-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 -gedq-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 -gedn-----r-----------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 -gedk-----r-----------------------------
============================================================================
* HUMAN ----------------------------------------
* S_CEREVISIAE -----qeqh--isesqlqy-g-ngslmstvpadlsqsvvd
* Apis_mellifera ----------------------------------------
* Aspergillus_flavus ----------------------------------------
* Aspergillus_fumigatus ----------------------------------------
* Bovine ----------------------------------------
* C_elegans ----------------------------------------
* Candida_albicans g---------------------------------------
* Candida_glabrata -----hedhg-vpdsqv-n----vspistapaettqs---
* Canis_lupus ----------------------------------------
* Chaetomium_globosum ----------------------------------------
* Coccidioides_immitis ----------------------------------------
* Coprinus_cinereus ----------------------------------------
* Cricetulus_griseus ----------------------------------------
* Cryptococcus_neoformans ----------------------------------------
* Danio_rerio ----------------------------------------
* Debaryomyces_hansenii ----------------------------------------
* D_melanogaster ----------------------------------------
* D_pseudoobscura ----------------------------------------
* Emericella_nidulans ----------------------------------------
* Encephalitozoon_cuniculi ----------------------------------------
* Eremothecium_gossypii d---------------------------------------
* Chicken ----------------------------------------
* Gibberella_zeae ----------------------------------------
* Kluyveromyces_lactis -------sq--veevqttq-g-hsqlmvsr----------
* Mouse ----------------------------------------
* Neurospora_crassa ----------------------------------------
* Rabbit ----------------------------------------
* Pichia_angusta ----------------------------------------
* Rat ----------------------------------------
* Schizosaccharomyces_pombe a---------------------------------------
* Strongylocentrotus_purpuratus ----------------------------------------
* Tetraodon_nigroviridis ----------------------------------------
* Tribolium_castaneum ----------------------------------------
* Ustilago_maydis ----------------------------------------
* X_tropicalis ----------------------------------------
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ----------------------------------------
* X_laevis-RA51B ----------------------------------------
Cryptosporidium_hominis ----------------------------------------
Cryptosporidium_parvum ----------------------------------------
Dictyostelium_discoideum ----------------------------------------
Entamoeba_histolytica ----------------------------------------
Leishmania_donovani q---------------------------------------
Leishmania_tropica q---------------------------------------
Plasmodium_berghei ----------------------------------------
Plasmodium_falciparum ----------------------------------------
Tetrahymena_thermophila ----------------------------------------
Theileria_annulata ----------------------------------------
Theileria_parva ----------------------------------------
Trypanosoma_brucei a---------------------------------------
Trypanosoma_cruzi a---------------------------------------
P Arabidopsis_thaliana ----------------------------------------
P Oryza_sativa ----------------------------------------
P Maize-R51A1 ----------------------------------------
P Maize-R51A2 ----------------------------------------
============================================================================
B E_COLI ----------------------------------------
B MYCOBACTERIUM_SMEGMATIS ----------------------------------------
B MYCOBACTERIUM_TUBERCULOSIS ----------------------------------------
B Acinetobacter_calcoaceticus ----------------------------------------
B Actinobacillus_pleuropneumoniae ----------------------------------------
B Actinobacillus_succinogenes ----------------------------------------
B Actinomyces_bovis ----------------------------------------
B Azotobacter_vinelandii ----------------------------------------
B Bacillus_clausii ----------------------------------------
B Bacillus_halodurans ----------------------------------------
B Bacillus_licheniformis ----------------------------------------
B Bacillus_megaterium ----------------------------------------
B Bacillus_subtilis ----------------------------------------
B Bordetella_pertussis ----------------------------------------
B Burkholderia_fungorum ----------------------------------------
B Chromobacterium_violaceum ----------------------------------------
B Clostridium_acetobutylicum ----------------------------------------
B Clostridium_thermocellum ----------------------------------------
B Colwellia_psychrerythraea ----------------------------------------
B Corynebacterium_efficiens ----------------------------------------
B Desulfotalea_psychrophila ----------------------------------------
B Enterococcus_faecalis ----------------------------------------
B Haemophilus_ducreyi ----------------------------------------
B Haemophilus_influenzae ----------------------------------------
B Histophilus_somni ----------------------------------------
B Kineococcus_radiotolerans ----------------------------------------
B Leifsonia_xyli ----------------------------------------
B Mannheimia_succiniciproducens ----------------------------------------
B Nitrosomonas_europaea ----------------------------------------
B Nitrosomonas_eutropha ----------------------------------------
B Oceanobacillus_iheyensis ----------------------------------------
B Pasteurella_multocida ----------------------------------------
B Photobacterium_profundum ----------------------------------------
B Photorhabdus_luminescens ----------------------------------------
B Proteus_mirabilis ----------------------------------------
B Pseudomonas_cepacia ----------------------------------------
B Pseudomonas_pseudomallei ----------------------------------------
B Shewanella_amazonensis ----------------------------------------
B Shewanella_putrefaciens ----------------------------------------
B Streptomyces_avermitilis ----------------------------------------
B Vibrio_alginolyticus ----------------------------------------
B Vibrio_angustum ----------------------------------------
B Vibrio_cholerae ----------------------------------------
B Vibrio_fischeri ----------------------------------------
B Vibrio_parahaemolyticus ----------------------------------------
B Vibrio_splendidus ----------------------------------------
B Vibrio_vulnificus ----------------------------------------
B Yersinia_enterocolitica ----------------------------------------
B Cupriavidus_metallidurans-Q1LR74 ----------------------------------------
B Cupriavidus_metallidurans-RECA ----------------------------------------
B Erwinia_carotovora-RECA ----------------------------------------
B Erwinia_carotovora-RECA_ERWCT ----------------------------------------
B Listeria_monocytogenes-RECA ----------------------------------------
B Listeria_monocytogenes-RECA_LISMF ----------------------------------------
B Neisseria_gonorrhoeae-RECA ----------------------------------------
B Neisseria_gonorrhoeae-RECA_VAR ----------------------------------------
B Salmonella_typhi-RECA ----------------------------------------
B Salmonella_typhi-RECA_SALPA ----------------------------------------
B Streptomyces_coelicolor-RECA ----------------------------------------
B Streptomyces_coelicolor-RECA_STRL ----------------------------------------
B Xylella_fastidiosa-RECA ----------------------------------------
B Xylella_fastidiosa-RECA_XYLFT ----------------------------------------
B Yersinia_pestis-RECA ----------------------------------------
B Yersinia_pestis-RECA_YERPS ----------------------------------------
B Mycobacterium_tuberculosis-RECA ----------------------------------------
B Mycobacterium_tuberculosis-RECA_M ----------------------------------------
B Neisseria_meningitidis-RECA ----------------------------------------
B Neisseria_meningitidis-RECA_NEIMA ----------------------------------------
B Neisseria_meningitidis-RECA_VAR ----------------------------------------
B Xanthomonas_vasicola-RECA_XANAC ----------------------------------------
B Xanthomonas_vasicola-RECA_XANCP ----------------------------------------
B Xanthomonas_vasicola-YP_201580 ----------------------------------------
B Pseudomonas_aeruginosa-Q48F94 ----------------------------------------
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS -----mskd--atkeisap-t-d-----------------
B Deinococcus_geothermalis ------skd--npkdfgtp-s-d-----------------
B Thermus_aquaticus-RECA ----------------------------------------
B Thermus_aquaticus-RECA_THET2 ----------------------------------------
B Thermus_aquaticus-RECA_THET8 ----------------------------------------
B Thermus_aquaticus-RECA_THETH ----------------------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
90 100 110 120
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxdxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS --------------------kii-r-si------------
A Archaeoglobus_fulgidus --------------------kii---el------------
A Pyrococcus_abyssi --------------------kei-r-ti------------
============================================================================
A METHANOCOCCUS_VOLTAE -----------------------l--td------------
A Methanococcus_jannaschii -----------------------l--tq------------
A Methanococcus_maripaludis -----------------------l--te------------
============================================================================
A SULFOLOBUS_SOLFATARICUS -----------------------n--ik------------
A Desulfurococcus_amylolyticus -----------------------g--fi------------
A Sulfolobus_acidocaldarius -----------------------k--vk------------
A Sulfolobus_tokodaii -----------------------k--vk------------
A Aeropyrum_pernix-RADA -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_OH1 -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_OH2 -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_OH3 -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_TB1 -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_TB2 -----------------------e--ik------------
A Aeropyrum_pernix-RADA_VAR_TB6 -----------------------e--ik------------
============================================================================
* HUMAN ------------------------a---mqmql-ean-a-
* S_CEREVISIAE gngngssedieatngsgdgg----g---lqeqa-eaq-ge
* Apis_mellifera -------------------s----a---masta-slq-gd
* Aspergillus_flavus ------------------------t---aDmdt-qne-y-
* Aspergillus_fumigatus ------------------------t---aDlet-qne-y-
* Bovine ------------------------a---mqmql-ean-a-
* C_elegans ------------------------a---dqall-naa-i-
* Candida_albicans ------------------------s---hpqni-nad-a-
* Candida_glabrata -----------stnrsmdynsge-q---lfhqe-qye-eg
* Canis_lupus ------------------------a---mqmql-ean-a-
* Chaetomium_globosum ------------------------a---gheeydesg-s-
* Coccidioides_immitis ------------------------g---aEael-dgy-e-
* Coprinus_cinereus ------------------------s---qgydg-sqi-p-
* Cricetulus_griseus ------------------------a---mqmql-ean-a-
* Cryptococcus_neoformans ------------sreqeqdp----f---vNqhg-e----e
* Danio_rerio -----------------------------amrn-asr-ve
* Debaryomyces_hansenii ------------------------e---gaqtn-ehe-a-
* D_melanogaster -----------------------------Eklt-nvq-aq
* D_pseudoobscura -----------------------------------da-l-
* Emericella_nidulans ------------------------t---aDmet-qne-f-
* Encephalitozoon_cuniculi ------------------------s---eEyqy-q-----
* Eremothecium_gossypii ------------------------v---iEvha-esg-r-
* Chicken ------------------------a---mqvqf-eas-t-
* Gibberella_zeae ------------------------s---qEhde-sqm-g-
* Kluyveromyces_lactis -----teeqme-------------d---vqqri-qet-df
* Mouse ------------------------a---mqmql-eas-a-
* Neurospora_crassa ------------------------n---eEyde-sanme-
* Rabbit ------------------------a---mqmql-ean-a-
* Pichia_angusta ------------------------v---gEqel-sag-y-
* Rat ------------------------a---mqmql-ean-a-
* Schizosaccharomyces_pombe ------------------------q---sNyey-dvn-v-
* Strongylocentrotus_purpuratus ------------------------a---mqmh----n-a-
* Tetraodon_nigroviridis ------------------------a---maaev-rgq-a-
* Tribolium_castaneum --------------------------------e-asl-as
* Ustilago_maydis ------------------------s---qNaqd-paq-i-
* X_tropicalis ------------------------a---mqahy-eae-a-
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ------------------------a---mqahy-eae-a-
* X_laevis-RA51B ------------------------a---mqahy-qae-a-
Cryptosporidium_hominis ------------------------p---nEvvn-enn-e-
Cryptosporidium_parvum ------------------------p---nEivn-enn-e-
Dictyostelium_discoideum ------------------------e---eEvdi-ene-q-
Entamoeba_histolytica ------------------------k---vNeee-hee-e-
Leishmania_donovani ------------------------e---pqqpq-qqq-s-
Leishmania_tropica ------------------------e---pqqqq-qqq-s-
Plasmodium_berghei ------------------------a---kEdti-sqt-c-
Plasmodium_falciparum ----------kqantkedks----q---kisns-sti-de
Tetrahymena_thermophila -----------------------------------ae-y-
Theileria_annulata ------------------------e---lslvk-een-s-
Theileria_parva ------------------------e---lslvk-een-s-
Trypanosoma_brucei ------------------------f---dDaav-dav-n-
Trypanosoma_cruzi ------------------------p---eqqqq-qqe-d-
P Arabidopsis_thaliana ------------------------t---tmeqr-rnq-na
P Oryza_sativa ------------------------s---tsaaa-aaa-a-
P Maize-R51A1 -----------------ssa----a---qqqqk-aaa-ae
P Maize-R51A2 -----------------sss----s---ahqka-spp-ie
============================================================================
B E_COLI ------------------------d---eN----------
B MYCOBACTERIUM_SMEGMATIS ------------------------a---pD----------
B MYCOBACTERIUM_TUBERCULOSIS ------------------------a---pD----------
B Acinetobacter_calcoaceticus ------------------------d---dN----------
B Actinobacillus_pleuropneumoniae ------------------------dp--eq----------
B Actinobacillus_succinogenes ------------------------a---eE----------
B Actinomyces_bovis ------------------------a---yD----------
B Azotobacter_vinelandii ------------------------d---eN----------
B Bacillus_clausii ----------------------------sD----------
B Bacillus_halodurans ----------------------------sD----------
B Bacillus_licheniformis ----------------------------sD----------
B Bacillus_megaterium ----------------------------nD----------
B Bacillus_subtilis ----------------------------sD----------
B Bordetella_pertussis ------------------------a---aE----------
B Burkholderia_fungorum ------------------------t---aE----------
B Chromobacterium_violaceum ------------------------s---eD----------
B Clostridium_acetobutylicum ------------------------d---nE----------
B Clostridium_thermocellum ------------------------e---------------
B Colwellia_psychrerythraea ------------------------k---dD----------
B Corynebacterium_efficiens ------------------------g---dD----------
B Desulfotalea_psychrophila ------------------------a---kD----------
B Enterococcus_faecalis ------------------------a---bD----------
B Haemophilus_ducreyi ------------------------dp--eq----------
B Haemophilus_influenzae ------------------------q---eE----------
B Histophilus_somni ------------------------p---eE----------
B Kineococcus_radiotolerans ------------------------p---aD----------
B Leifsonia_xyli ------------------------p---aD----------
B Mannheimia_succiniciproducens ------------------------n---dE----------
B Nitrosomonas_europaea ------------------------d---eN----------
B Nitrosomonas_eutropha ------------------------d---eN----------
B Oceanobacillus_iheyensis ----------------------------sD----------
B Pasteurella_multocida ------------------------k---eE----------
B Photobacterium_profundum ------------------------d---dN----------
B Photorhabdus_luminescens ------------------------d---eN----------
B Proteus_mirabilis ------------------------d---eN----------
B Pseudomonas_cepacia ------------------------t---aE----------
B Pseudomonas_pseudomallei ------------------------t---aE----------
B Shewanella_amazonensis ------------------------d---pN----------
B Shewanella_putrefaciens ------------------------d---pN----------
B Streptomyces_avermitilis ------------------------g---tD----------
B Vibrio_alginolyticus ------------------------d---eN----------
B Vibrio_angustum ------------------------d---dN----------
B Vibrio_cholerae ------------------------d---eN----------
B Vibrio_fischeri ------------------------d---dN----------
B Vibrio_parahaemolyticus ------------------------d---eN----------
B Vibrio_splendidus ------------------------d---eN----------
B Vibrio_vulnificus ------------------------d---eN----------
B Yersinia_enterocolitica ------------------------d---eN----------
B Cupriavidus_metallidurans-Q1LR74 ------------------------s---aE----------
B Cupriavidus_metallidurans-RECA ------------------------s---aE----------
B Erwinia_carotovora-RECA ------------------------d---eN----------
B Erwinia_carotovora-RECA_ERWCT ------------------------d---eN----------
B Listeria_monocytogenes-RECA ----------------------------nD----------
B Listeria_monocytogenes-RECA_LISMF ----------------------------nD----------
B Neisseria_gonorrhoeae-RECA ------------------------s---dD----------
B Neisseria_gonorrhoeae-RECA_VAR ------------------------s---dD----------
B Salmonella_typhi-RECA ------------------------d---eN----------
B Salmonella_typhi-RECA_SALPA ------------------------d---eN----------
B Streptomyces_coelicolor-RECA ------------------------g---tD----------
B Streptomyces_coelicolor-RECA_STRL ------------------------g---tD----------
B Xylella_fastidiosa-RECA ------------------------d---eN----------
B Xylella_fastidiosa-RECA_XYLFT ------------------------d---eN----------
B Yersinia_pestis-RECA ------------------------d---eN----------
B Yersinia_pestis-RECA_YERPS ------------------------d---eN----------
B Mycobacterium_tuberculosis-RECA ------------------------t---pD----------
B Mycobacterium_tuberculosis-RECA_M ------------------------a---pD----------
B Neisseria_meningitidis-RECA ------------------------s---dD----------
B Neisseria_meningitidis-RECA_NEIMA ------------------------s---dD----------
B Neisseria_meningitidis-RECA_VAR ------------------------s---dD----------
B Xanthomonas_vasicola-RECA_XANAC ------------------------d---eN----------
B Xanthomonas_vasicola-RECA_XANCP ------------------------d---eN----------
B Xanthomonas_vasicola-YP_201580 ------------------------d---eN----------
B Pseudomonas_aeruginosa-Q48F94 ------------------------d---dN----------
B Pseudomonas_aeruginosa-RECA ------------------------d---eN----------
B Pseudomonas_aeruginosa-RECA_PSEF5 ------------------------d---dN----------
B Pseudomonas_aeruginosa-RECA_PSEFL ------------------------d---dN----------
B Pseudomonas_aeruginosa-RECA_PSEPK ------------------------d---dN----------
B Pseudomonas_aeruginosa-RECA_PSEPU ------------------------d---dN----------
B Pseudomonas_aeruginosa-RECA_PSESM ------------------------d---dN----------
============================================================================
B DEINOCOCCUS_RADIODURANS -----------------------a--ke------------
B Deinococcus_geothermalis -----------------------s--ke------------
B Thermus_aquaticus-RECA -----------------------e--en------------
B Thermus_aquaticus-RECA_THET2 -----------------------d--es------------
B Thermus_aquaticus-RECA_THET8 -----------------------d--es------------
B Thermus_aquaticus-RECA_THETH -----------------------d--es------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxdxxxxxxxxxx
130 140 150 160
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------------
A Archaeoglobus_fulgidus ----------------------------------------
A Pyrococcus_abyssi ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------------------------------
A Desulfurococcus_amylolyticus ----------------------------------------
A Sulfolobus_acidocaldarius ----------------------------------------
A Sulfolobus_tokodaii ----------------------------------------
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN --dts------v-----eee-----s---f--g-p--q--
* S_CEREVISIAE medea------y-----dea-----a---l--g-sf-v--
* Apis_mellifera eefee------y-----npq-----a-----------k--
* Aspergillus_flavus --dds------g-----lpg-----p---g--a-p--t--
* Aspergillus_fumigatus --des------g-----lpg-----p---g--a-p--t--
* Bovine --dts------v-----eee-----s---f--g-p--q--
* C_elegans --edn------a-----meq-----d---e--n-f--t--
* Candida_albicans --eve------a-----eed-----edvln--g-p--l--
* Candida_glabrata me---------------eda-----a---l--a-sf-v--
* Canis_lupus --dts------v-----eee-----s---f--g-p--q--
* Chaetomium_globosum --aed------v-----gqt-----g---p--gap--t--
* Coccidioides_immitis --dgd------c-----hap-----g------a-p--t--
* Coprinus_cinereus --egd------e-----edy-----q---f-sg-p--l--
* Cricetulus_griseus --dts------v-----eee-----s---f--g-p--q--
* Cryptococcus_neoformans aeeed------f-----e-------s---l--a-pm-l--
* Danio_rerio veaev------e-----eee-----n---f--g-p--q--
* Debaryomyces_hansenii --smg------d-----eed-----g---ls-g-p--l--
* D_melanogaster qeeee------------eeg-----p---l----------
* D_pseudoobscura --tns------v-----eee-----e---n--g-p--l--
* Emericella_nidulans --dds------g-----lpg-----p---g--a-p--t--
* Encephalitozoon_cuniculi --dte------y-----hse-----s---i----------
* Eremothecium_gossypii --gqg------y-----eed-----v---a--l-a--af-
* Chicken --dts------a-----eee-----s---f--g-p--e--
* Gibberella_zeae --eeg------g-----mpg-----p---g--a-p--t--
* Kluyveromyces_lactis maee-------------ddv-----a---l--a-af-v--
* Mouse --dts------v-----eee-----s---f--g-p--q--
* Neurospora_crassa --dds------g-----ipn-----p---g--a-p--t--
* Rabbit --dts------v-----eee-----s---f--g-p--q--
* Pichia_angusta --hes------mvaeddedy-----s---a--g-p--v--
* Rat --dts------v-----eee-----s---f--g-p--q--
* Schizosaccharomyces_pombe --qde------e-----dea-----a---a--g-p--m--
* Strongylocentrotus_purpuratus --eqe------v-----see---------f--g-p--l--
* Tetraodon_nigroviridis --eve------------eee-----n---f--g-p--q--
* Tribolium_castaneum tdtvv------e-----dea-----k---n--g-gp-q--
* Ustilago_maydis --ged------d-----mge-----a---f--g-p--l--
* X_tropicalis -----------t-----eee-----n---f--g-p--q--
* Yarrowia_lipolytica ----a------d-----eei-----e---r--a-ga-i--
* X_laevis-RA51A -----------t-----eee-----h---f--g-p--q--
* X_laevis-RA51B -----------t-----eee-----n---f--g-p--q--
Cryptosporidium_hominis --nqn------n-----lne-----t---vyng-p--l--
Cryptosporidium_parvum --nqn------n-----lne-----t---vyng-p--l--
Dictyostelium_discoideum --qqe------e-----eee-----e---e--e-e--esy
Entamoeba_histolytica --eee------e-----eee-----e---n--a-a--v--
Leishmania_donovani --tdm------a-----epn-----a---s--g-f--r--
Leishmania_tropica --tdm------a-----epn-----a---s--g-f--r--
Plasmodium_berghei --dns------t-----tedvdehly---t--g-p--l--
Plasmodium_falciparum ieeeq------l-----ytg-----p---l----------
Tetrahymena_thermophila --aed------v-----eqs-----d------g-p--m--
Theileria_annulata --mgv------s-----esg-----s---q--n-p--q--
Theileria_parva --mgv------s-----etg-----s---q--n-p--q--
Trypanosoma_brucei --dntqemqqqv-----gda-----a---g--g-psfr--
Trypanosoma_cruzi --qqn------v-----dga-----n---n--g-g-fr--
P Arabidopsis_thaliana vqqqd------d-----eet-----q---h--g-pf----
P Oryza_sativa --eqq------q-----eeg-----e---h--g-p--f--
P Maize-R51A1 qe----------------ev-----e---h--g-pf----
P Maize-R51A2 ee----------------at-----e---h--g-pf----
============================================================================
B E_COLI ----------------------------------------
B MYCOBACTERIUM_SMEGMATIS ----------------------------------------
B MYCOBACTERIUM_TUBERCULOSIS ----------------------------------------
B Acinetobacter_calcoaceticus ----------------------------------------
B Actinobacillus_pleuropneumoniae ----------------------------------------
B Actinobacillus_succinogenes ----------------------------------------
B Actinomyces_bovis ----------------------------------------
B Azotobacter_vinelandii ----------------------------------------
B Bacillus_clausii ----------------------------------------
B Bacillus_halodurans ----------------------------------------
B Bacillus_licheniformis ----------------------------------------
B Bacillus_megaterium ----------------------------------------
B Bacillus_subtilis ----------------------------------------
B Bordetella_pertussis ----------------------------------------
B Burkholderia_fungorum ----------------------------------------
B Chromobacterium_violaceum ----------------------------------------
B Clostridium_acetobutylicum ----------------------------------------
B Clostridium_thermocellum ----------------------------------------
B Colwellia_psychrerythraea ----------------------------------------
B Corynebacterium_efficiens ----------------------------------------
B Desulfotalea_psychrophila ----------------------------------------
B Enterococcus_faecalis ----------------------------------------
B Haemophilus_ducreyi ----------------------------------------
B Haemophilus_influenzae ----------------------------------------
B Histophilus_somni ----------------------------------------
B Kineococcus_radiotolerans ----------------------------------------
B Leifsonia_xyli ----------------------------------------
B Mannheimia_succiniciproducens ----------------------------------------
B Nitrosomonas_europaea ----------------------------------------
B Nitrosomonas_eutropha ----------------------------------------
B Oceanobacillus_iheyensis ----------------------------------------
B Pasteurella_multocida ----------------------------------------
B Photobacterium_profundum ----------------------------------------
B Photorhabdus_luminescens ----------------------------------------
B Proteus_mirabilis ----------------------------------------
B Pseudomonas_cepacia ----------------------------------------
B Pseudomonas_pseudomallei ----------------------------------------
B Shewanella_amazonensis ----------------------------------------
B Shewanella_putrefaciens ----------------------------------------
B Streptomyces_avermitilis ----------------------------------------
B Vibrio_alginolyticus ----------------------------------------
B Vibrio_angustum ----------------------------------------
B Vibrio_cholerae ----------------------------------------
B Vibrio_fischeri ----------------------------------------
B Vibrio_parahaemolyticus ----------------------------------------
B Vibrio_splendidus ----------------------------------------
B Vibrio_vulnificus ----------------------------------------
B Yersinia_enterocolitica ----------------------------------------
B Cupriavidus_metallidurans-Q1LR74 ----------------------------------------
B Cupriavidus_metallidurans-RECA ----------------------------------------
B Erwinia_carotovora-RECA ----------------------------------------
B Erwinia_carotovora-RECA_ERWCT ----------------------------------------
B Listeria_monocytogenes-RECA ----------------------------------------
B Listeria_monocytogenes-RECA_LISMF ----------------------------------------
B Neisseria_gonorrhoeae-RECA ----------------------------------------
B Neisseria_gonorrhoeae-RECA_VAR ----------------------------------------
B Salmonella_typhi-RECA ----------------------------------------
B Salmonella_typhi-RECA_SALPA ----------------------------------------
B Streptomyces_coelicolor-RECA ----------------------------------------
B Streptomyces_coelicolor-RECA_STRL ----------------------------------------
B Xylella_fastidiosa-RECA ----------------------------------------
B Xylella_fastidiosa-RECA_XYLFT ----------------------------------------
B Yersinia_pestis-RECA ----------------------------------------
B Yersinia_pestis-RECA_YERPS ----------------------------------------
B Mycobacterium_tuberculosis-RECA ----------------------------------------
B Mycobacterium_tuberculosis-RECA_M ----------------------------------------
B Neisseria_meningitidis-RECA ----------------------------------------
B Neisseria_meningitidis-RECA_NEIMA ----------------------------------------
B Neisseria_meningitidis-RECA_VAR ----------------------------------------
B Xanthomonas_vasicola-RECA_XANAC ----------------------------------------
B Xanthomonas_vasicola-RECA_XANCP ----------------------------------------
B Xanthomonas_vasicola-YP_201580 ----------------------------------------
B Pseudomonas_aeruginosa-Q48F94 ----------------------------------------
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS ----------------------------------------
B Deinococcus_geothermalis ----------------------------------------
B Thermus_aquaticus-RECA ----------------------------------------
B Thermus_aquaticus-RECA_THET2 ----------------------------------------
B Thermus_aquaticus-RECA_THET8 ----------------------------------------
B Thermus_aquaticus-RECA_THETH ----------------------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
170 180 190 200
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ------------------------edlpgvgpataeklre
A Archaeoglobus_fulgidus ------------------------edipgvgpetarklre
A Pyrococcus_abyssi ------------------------edlpgvgpataeklre
============================================================================
A METHANOCOCCUS_VOLTAE ---------------------------lpgvgpstaeklv
A Methanococcus_jannaschii ---------------------------lpgvgpttaeklk
A Methanococcus_maripaludis ---------------------------lpgvgpstadkli
============================================================================
A SULFOLOBUS_SOLFATARICUS -----------------------tindlpgisqtvinkli
A Desulfurococcus_amylolyticus -----------------------svrdipgvgssiadkle
A Sulfolobus_acidocaldarius -----------------------slsdlsgvgqnilnklv
A Sulfolobus_tokodaii -----------------------slsdlpgvgqsilnkli
A Aeropyrum_pernix-RADA -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_OH1 -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_OH2 -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_OH3 -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_TB1 -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_TB2 -----------------------ditdlpgvgpttaqklm
A Aeropyrum_pernix-RADA_VAR_TB6 -----------------------ditdlpgvgpttaqklm
============================================================================
* HUMAN -pisrl-e---------------qc----ginandvkkle
* S_CEREVISIAE -piekl-q---------------vn----gitmadvkklr
* Apis_mellifera -liktl-e---------------gn----gitagdvkkle
* Aspergillus_flavus -plsal-e------g--------va----gltgrdiklfv
* Aspergillus_fumigatus -plsal-e------g--------va----gltsrdiklfv
* Bovine -pisrl-e---------------qc----ginandvkkle
* C_elegans -vidkl-e---------------ss----gissgdisklk
* Candida_albicans -lieql-e---------------gn----ginasdikklk
* Candida_glabrata -plekl-q---------------vn----gitstdikklr
* Canis_lupus -pisrl-e---------------qc----ginandvkkle
* Chaetomium_globosum -pllal-e------g--------vs----gltkreiqaiv
* Coccidioides_immitis -plsal-evytfhigirrpisefmcqgvngltardiklli
* Coprinus_cinereus -lvnkl-q---------------ea----gihandikkla
* Cricetulus_griseus -pisrl-e---------------qc----gisandvkkle
* Cryptococcus_neoformans --vakl-q---------------ea----gisaqdtkkla
* Danio_rerio -pvsrl-e---------------qs----gisssdikkle
* Debaryomyces_hansenii -lieql-e---------------gn----gitsgdirklk
* D_melanogaster -svtkl-i---------------gg----sitakdikllq
* D_pseudoobscura -nvtkl-i---------------gg----sitakdikllq
* Emericella_nidulans -plssl-e------g--------ma----gltsrdiklfv
* Encephalitozoon_cuniculi -sisel-k---------------ng----gilavdiakli
* Eremothecium_gossypii vplerl-q---------------vn----gitnndlkklr
* Chicken -pisrl-e---------------qc----ginandvkkle
* Gibberella_zeae -plfal-e------g--------va----gltkrdiqlvv
* Kluyveromyces_lactis -piekl-q---------------vn----gitsgdikklr
* Mouse -pisrl-e---------------qc----ginandvkkle
* Neurospora_crassa -plsal-e------g--------va----gltkrdiqliv
* Rabbit -pvsrl-e---------------qc----ginandvkkle
* Pichia_angusta -piqql-v---------------gn----gitpqdikklk
* Rat -pisrl-e---------------qc----ginandvkkle
* Schizosaccharomyces_pombe -plqml-e---------------gn----gitasdikkih
* Strongylocentrotus_purpuratus -gisrl-e---------------as----gissndvkkle
* Tetraodon_nigroviridis -plcrl-e---------------qc----gisasdikkle
* Tribolium_castaneum -plskl-q---------------vn----gitagdlkkle
* Ustilago_maydis -pvskl-e---------------ef----gisssdckkla
* X_tropicalis -aisrl-e---------------qc----ginandvkkle
* Yarrowia_lipolytica -pierl-a---------------vn----gitqtdinrlg
* X_laevis-RA51A -aisrl-e---------------qc----ginandvkkle
* X_laevis-RA51B -aitrl-e---------------qc----ginandvkkle
Cryptosporidium_hominis -klehl-l---------------ps----gltkrdleilr
Cryptosporidium_parvum -klehl-l---------------ps----gltkrdleilr
Dictyostelium_discoideum lsinkl-e---------------gn----ginaadlkklq
Entamoeba_histolytica -pirklig---------------la----gitegdckkle
Leishmania_donovani -viqil-e---------------ny----gvassdikklm
Leishmania_tropica -viqil-e---------------ny----gvassdikklm
Plasmodium_berghei -kieql-l---------------ak----gfvkrdlellk
Plasmodium_falciparum -kieql-l---------------ak----gfvkrdlellk
Tetrahymena_thermophila -liakl-e---------------eh----ginnadvkkli
Theileria_annulata -rlecl-l---------------sk----gllqrdldllr
Theileria_parva -rlecl-l---------------sk----gllqrdldllr
Trypanosoma_brucei -vlqim-e---------------ny----gvasadikklm
Trypanosoma_cruzi -viqvl-e---------------sy----giasadikklm
P Arabidopsis_thaliana -pveql-q---------------aa----giasvdvkklr
P Oryza_sativa -pieql-q---------------as----giaaldvkklk
P Maize-R51A1 -pieql-q---------------as----giaaldvkklk
P Maize-R51A2 -pieql-q---------------as----giaaldvkklk
============================================================================
B E_COLI ----------------------------------------
B MYCOBACTERIUM_SMEGMATIS ----------------------------------------
B MYCOBACTERIUM_TUBERCULOSIS ----------------------------------------
B Acinetobacter_calcoaceticus ----------------------------------------
B Actinobacillus_pleuropneumoniae ----------------------------------------
B Actinobacillus_succinogenes ----------------------------------------
B Actinomyces_bovis ----------------------------------------
B Azotobacter_vinelandii ----------------------------------------
B Bacillus_clausii ----------------------------------------
B Bacillus_halodurans ----------------------------------------
B Bacillus_licheniformis ----------------------------------------
B Bacillus_megaterium ----------------------------------------
B Bacillus_subtilis ----------------------------------------
B Bordetella_pertussis ----------------------------------------
B Burkholderia_fungorum ----------------------------------------
B Chromobacterium_violaceum ----------------------------------------
B Clostridium_acetobutylicum ----------------------------------------
B Clostridium_thermocellum ----------------------------------------
B Colwellia_psychrerythraea ----------------------------------------
B Corynebacterium_efficiens ----------------------------------------
B Desulfotalea_psychrophila ----------------------------------------
B Enterococcus_faecalis ----------------------------------------
B Haemophilus_ducreyi ----------------------------------------
B Haemophilus_influenzae ----------------------------------------
B Histophilus_somni ----------------------------------------
B Kineococcus_radiotolerans ----------------------------------------
B Leifsonia_xyli ----------------------------------------
B Mannheimia_succiniciproducens ----------------------------------------
B Nitrosomonas_europaea ----------------------------------------
B Nitrosomonas_eutropha ----------------------------------------
B Oceanobacillus_iheyensis ----------------------------------------
B Pasteurella_multocida ----------------------------------------
B Photobacterium_profundum ----------------------------------------
B Photorhabdus_luminescens ----------------------------------------
B Proteus_mirabilis ----------------------------------------
B Pseudomonas_cepacia ----------------------------------------
B Pseudomonas_pseudomallei ----------------------------------------
B Shewanella_amazonensis ----------------------------------------
B Shewanella_putrefaciens ----------------------------------------
B Streptomyces_avermitilis ----------------------------------------
B Vibrio_alginolyticus ----------------------------------------
B Vibrio_angustum ----------------------------------------
B Vibrio_cholerae ----------------------------------------
B Vibrio_fischeri ----------------------------------------
B Vibrio_parahaemolyticus ----------------------------------------
B Vibrio_splendidus ----------------------------------------
B Vibrio_vulnificus ----------------------------------------
B Yersinia_enterocolitica ----------------------------------------
B Cupriavidus_metallidurans-Q1LR74 ----------------------------------------
B Cupriavidus_metallidurans-RECA ----------------------------------------
B Erwinia_carotovora-RECA ----------------------------------------
B Erwinia_carotovora-RECA_ERWCT ----------------------------------------
B Listeria_monocytogenes-RECA ----------------------------------------
B Listeria_monocytogenes-RECA_LISMF ----------------------------------------
B Neisseria_gonorrhoeae-RECA ----------------------------------------
B Neisseria_gonorrhoeae-RECA_VAR ----------------------------------------
B Salmonella_typhi-RECA ----------------------------------------
B Salmonella_typhi-RECA_SALPA ----------------------------------------
B Streptomyces_coelicolor-RECA ----------------------------------------
B Streptomyces_coelicolor-RECA_STRL ----------------------------------------
B Xylella_fastidiosa-RECA ----------------------------------------
B Xylella_fastidiosa-RECA_XYLFT ----------------------------------------
B Yersinia_pestis-RECA ----------------------------------------
B Yersinia_pestis-RECA_YERPS ----------------------------------------
B Mycobacterium_tuberculosis-RECA ----------------------------------------
B Mycobacterium_tuberculosis-RECA_M ----------------------------------------
B Neisseria_meningitidis-RECA ----------------------------------------
B Neisseria_meningitidis-RECA_NEIMA ----------------------------------------
B Neisseria_meningitidis-RECA_VAR ----------------------------------------
B Xanthomonas_vasicola-RECA_XANAC ----------------------------------------
B Xanthomonas_vasicola-RECA_XANCP ----------------------------------------
B Xanthomonas_vasicola-YP_201580 ----------------------------------------
B Pseudomonas_aeruginosa-Q48F94 ----------------------------------------
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS ----------------------------------------
B Deinococcus_geothermalis ----------------------------------------
B Thermus_aquaticus-RECA ----------------------------------------
B Thermus_aquaticus-RECA_THET2 ----------------------------------------
B Thermus_aquaticus-RECA_THET8 ----------------------------------------
B Thermus_aquaticus-RECA_THETH ----------------------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
210 220 230 240
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxkxxxxxxaxkivekxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS agydtleaiavaspielkevagisegtalkiIqaarkaan
A Archaeoglobus_fulgidus agystieavavaspselanvggitegnavkiIqaarklan
A Pyrococcus_abyssi agfdtleaiavaspielkevagisegaalkiIqaarkaan
============================================================================
A METHANOCOCCUS_VOLTAE eagyidfmkiatatvgeltdiEgisekaAaKMImgardlc
A Methanococcus_jannaschii eagytdfmkiatasigelteidgisekaAaRIIEaarelc
A Methanococcus_maripaludis eggyldfmkiatatigeltdiEgisekaAaKMImaardlc
============================================================================
A SULFOLOBUS_SOLFATARICUS eagyssletlavaspqdlsvaagiplstAqKIIKEardal
A Desulfurococcus_amylolyticus aagylsawsivvaraeelaertglpvltvqKIIEnarkml
A Sulfolobus_acidocaldarius eagyssleavavatpqdlsvaagipqttAqRIIKEareal
A Sulfolobus_tokodaii eagyssleavavaspqdlsvaagiplttAqRIIKEareal
A Aeropyrum_pernix-RADA eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
A Aeropyrum_pernix-RADA_VAR_OH1 eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
A Aeropyrum_pernix-RADA_VAR_OH2 eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
A Aeropyrum_pernix-RADA_VAR_OH3 eagyttleaiaaatpqevsqatgipiltAqKtVDaareal
A Aeropyrum_pernix-RADA_VAR_TB1 eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
A Aeropyrum_pernix-RADA_VAR_TB2 eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
A Aeropyrum_pernix-RADA_VAR_TB6 eagyttleaiaaatpqevsqatgipiltAqKIVDaareal
============================================================================
* HUMAN eagfhtveavayapkkeliniKgiseakAdKILaEaaklv
* S_CEREVISIAE esglhtaeavayaprkdlleiKgiseakAdKLLnEaarlv
* Apis_mellifera eagyytveavayapkkcliaiKgiseakAdKILQEasklv
* Aspergillus_flavus dagyhtvesiaytpkrlleqiKgiseqkAtKVLvEaaklv
* Aspergillus_fumigatus dagyhtvesiaytpkrlleqiKgiseqkAtKILvEaaklv
* Bovine eagfhtveavayapkkeliniKgiseakAdKILtEaaklv
* C_elegans eagyytyeslafttrrelrnvKgisdqkAeKIMKEamkfv
* Candida_albicans aegfhtiesiaytpkrhlmtvKgisenkAeKIsaEaaklv
* Candida_glabrata esglhtveavayapkkdlleiKgisetkAdRLLnEaarlv
* Canis_lupus eagfhtveavayapkkelisiKgiseakAdKILtEaaklv
* Chaetomium_globosum esglntveavaytpqrvleqvKgissqkAaKILaEasklv
* Coccidioides_immitis dggyhtveavaytpkrmleqiKgiseqkAaKILaEatkiv
* Coprinus_cinereus daglntveavaftpkknllaiRgiseqkAdKILaEaqkiv
* Cricetulus_griseus eagfhtveavayapkkeliniKgiseakAdKILaEaaklv
* Cryptococcus_neoformans dagfhtveavaftpkktlctiKgiseqkAdKILaEackmv
* Danio_rerio dggfhtveavayapkkellniKgiseakAdKILtEaakmv
* Debaryomyces_hansenii aegyhtiesiaytpkkalllvKgiseakAdKIslEaakvv
* D_melanogaster qaslhtvesvanatkkqlmaipglgggkveQIItEanklv
* D_pseudoobscura qaslhtvdavanatrkhllaipglggskvdQIIsEaskmv
* Emericella_nidulans dagyhtvesiaytpkrlleqiKgiseqkAtKILvEaaklv
* Encephalitozoon_cuniculi eagfttveslafapkrqllsiKgfsdikvdKLIKEaaklv
* Eremothecium_gossypii englhtveavayaprkdlleiKgiseakAdKLLaEaarlv
* Chicken eagyhtvesvahapkkellniKgiseakAdKILaEaaklv
* Gibberella_zeae dggyntvesvaytprrvleqiKgiseqkAtKILaEasklv
* Kluyveromyces_lactis esglhtaeavayaprkdlmeiKgiseakAdKLLaEasrlv
* Mouse eagyhtveavayapkkeliniKgiseakAdKILtEaaklv
* Neurospora_crassa dggfntvesvaytprrvleqiKgiseqkAgKILaEasklv
* Rabbit eagfhteeavayapkkeliniKgiseakAdKILtEaaklv
* Pichia_angusta eagfhtvesiaytpkrhivtvKgiseqkAdKLLmEasklv
* Rat eagyhtveavayapkkeliniKgiseakAdKILaEaaklv
* Schizosaccharomyces_pombe eagyytvesiaytpkrqllliKgiseakAdKLLgEasklv
* Strongylocentrotus_purpuratus eagmhtvesvaystkkelcavKgiseakAdKILtEaqklv
* Tetraodon_nigroviridis dagfhtieavayapkkellniKgiseakAdKILtEaaklv
* Tribolium_castaneum dagfhsiesiaytpkkvlgaiKgiseakvdKLLaEaakfv
* Ustilago_maydis esgyntvesiaftpkkqlllvKgvseakAdKILaEaarlv
* X_tropicalis eagfhtveavayapkkeliniKgiseakAeKILaEaaklv
* Yarrowia_lipolytica efglytvesvaytpkkhlltiKgiseakAdKLLsEasklv
* X_laevis-RA51A eagfhtveavayapkkellniKgiseakAeKILaEaaklv
* X_laevis-RA51B dagfhtveavayapkkellniKgiseakAeKILaEaaklv
Cryptosporidium_hominis engyhtieclayapkkallsvKgiseqkcdKIksackelv
Cryptosporidium_parvum engyhtieclayapkkallsvKgiseqkcdKIksackelv
Dictyostelium_discoideum eqglntvqavafttkktltgiKgiseqkAdKLLaEakklv
Entamoeba_histolytica eagfftvqsiaftpkkqlitiKgisdakAdKLLaEsskiv
Leishmania_donovani ecgfytvesaayapkkailavKgisenkAeKIMaEcaklv
Leishmania_tropica ecgfytvesaayapkkailavKgisenkAeKIMaEcaklv
Plasmodium_berghei egglqtvecvayapmrtlcsiKgiseqkAeKLkKackelc
Plasmodium_falciparum egglqtvecvayapmrtlcaiKgiseqkAeKLkKackelc
Tetrahymena_thermophila dagfqtvesisytakknllqiKgmteakidKILDvaaklv
Theileria_annulata eagystlecvayapqknllviKglseqkvlKIkaacrelc
Theileria_parva eagystlecvayapqknllviKglseqkvlKIkaacrelc
Trypanosoma_brucei ecgfltvesvayapkksilavKgiseakAeKIMaEccklt
Trypanosoma_cruzi esgfytvesvayapkknilavKgisetkAdKIMaEcaklv
P Arabidopsis_thaliana daglctvegvaytprkdllqiKgisdakvdKIVEaasklv
P Oryza_sativa dsglytvesvaytprkdllqiKgiseakvdKIVEaasklv
P Maize-R51A1 dsglhtveavaytprkdllqiKgiseakAdKIIEaaskiv
P Maize-R51A2 daglctvesvaysprkdllqiKgiseakvdKIIEaasklv
============================================================================
B E_COLI ---------------------KqkalaaAlgqIEKqfgkg
B MYCOBACTERIUM_SMEGMATIS ---------------------RekalelAmaqIDKnfgkg
B MYCOBACTERIUM_TUBERCULOSIS ---------------------RekalelAmaqIEKsygkg
B Acinetobacter_calcoaceticus ---------------------KskalqaAlsqIEKqfgkn
B Actinobacillus_pleuropneumoniae ---------------------KekalaaAlaqIEKqfgkg
B Actinobacillus_succinogenes ---------------------KskalaaAlgqIEKqfgkg
B Actinomyces_bovis ---------------------RdkalelAlaqVEKsfgkg
B Azotobacter_vinelandii ---------------------KkralaaAlgqIEKqfgkg
B Bacillus_clausii ---------------------RkqaldmAlRhIEKqfgkg
B Bacillus_halodurans ---------------------RkaaldmAlRqIEKqfgkg
B Bacillus_licheniformis ---------------------RqaaldmAlKqIEKqfgkg
B Bacillus_megaterium ---------------------RqaaldmAlKqIEKqfgkg
B Bacillus_subtilis ---------------------RqaaldmAlKqIEKqfgkg
B Bordetella_pertussis ---------------------KakalaaAlsqIEKqfgkg
B Burkholderia_fungorum ---------------------KskalaaAlaqIEKqfgkg
B Chromobacterium_violaceum ---------------------KskalaaAlaqIEKqfgkg
B Clostridium_acetobutylicum ---------------------KlkaidaAmsqIEKqfgkg
B Clostridium_thermocellum ---------------------KkkalemvlgqIEKqfgkg
B Colwellia_psychrerythraea ---------------------KekalsaAlaqIERqfgkg
B Corynebacterium_efficiens ---------------------RqkaldaAlaLIEKdfgkg
B Desulfotalea_psychrophila ---------------------KagsvenAisqIQKqfgkg
B Enterococcus_faecalis ---------------------RkvaldaAlKkIEKnfgkg
B Haemophilus_ducreyi ---------------------KekalaaAlaqIEKqfgkg
B Haemophilus_influenzae ---------------------KqkalaaAlgqIEKqfgkg
B Histophilus_somni ---------------------KakaleaAlgqIEKqfgkg
B Kineococcus_radiotolerans ---------------------RekaldaAlaaIDKnfgkg
B Leifsonia_xyli ---------------------RekalvtAlaqIDRqfgkg
B Mannheimia_succiniciproducens ---------------------KskalaaAlgqIEKqfgkg
B Nitrosomonas_europaea ---------------------KnkalsaAlaqIEKqygkg
B Nitrosomonas_eutropha ---------------------KnkaltaAlaqIEKqygkg
B Oceanobacillus_iheyensis ---------------------RkqaldmAlRqIEKqfgkg
B Pasteurella_multocida ---------------------KnkalaaAlgqIEKqfgkg
B Photobacterium_profundum ---------------------KqkalaaAlgqIEKqfgkg
B Photorhabdus_luminescens ---------------------KqkalaaAlgqIEKqfgkg
B Proteus_mirabilis ---------------------KqkalaaAlgqIEKqfgkg
B Pseudomonas_cepacia ---------------------KskalaaAlaqIEKqfgkg
B Pseudomonas_pseudomallei ---------------------KskalaaAlaqIEKqfgkg
B Shewanella_amazonensis ---------------------KekalaavlgqIEKqfgkg
B Shewanella_putrefaciens ---------------------KekalaavlsqIEKqfgkg
B Streptomyces_avermitilis ---------------------RekaldaAlaqIERqfgkg
B Vibrio_alginolyticus ---------------------KqkalaaAlgqIEKqfgkg
B Vibrio_angustum ---------------------KqkalaaAlgqIEKqfgkg
B Vibrio_cholerae ---------------------KqkalaaAlgqIEKqfgkg
B Vibrio_fischeri ---------------------KkkalaaAlgqIEKqfgkg
B Vibrio_parahaemolyticus ---------------------KqkalaaAlgqIEKqfgkg
B Vibrio_splendidus ---------------------KqkalaaAlgqIEKqfgkg
B Vibrio_vulnificus ---------------------KqkalaaAlgqIEKqfgkg
B Yersinia_enterocolitica ---------------------KqkalaaAlgqIEKqfgkg
B Cupriavidus_metallidurans-Q1LR74 ---------------------KqkalaaAlsqIEKqfgkg
B Cupriavidus_metallidurans-RECA ---------------------KqkalaaAlsqIEKqfgkg
B Erwinia_carotovora-RECA ---------------------KqkalaaAlgqIEKqfgkg
B Erwinia_carotovora-RECA_ERWCT ---------------------KqkalaaAlgqIEKqfgkg
B Listeria_monocytogenes-RECA ---------------------RqaaldqAlKqIEKqfgkg
B Listeria_monocytogenes-RECA_LISMF ---------------------RqaaldqAlKqIEKqfgkg
B Neisseria_gonorrhoeae-RECA ---------------------KskalaaAlaqIEKsfgkg
B Neisseria_gonorrhoeae-RECA_VAR ---------------------KskalaaAlaqIEKsfgkg
B Salmonella_typhi-RECA ---------------------KqkalaaAlgqIEKqfgkg
B Salmonella_typhi-RECA_SALPA ---------------------KqkalaaAmgqIEKqfgkg
B Streptomyces_coelicolor-RECA ---------------------RekaldaAlaqIERqfgkg
B Streptomyces_coelicolor-RECA_STRL ---------------------RekaldaAlaqIERqfgkg
B Xylella_fastidiosa-RECA ---------------------KkralsvAlsqIEKqfgkg
B Xylella_fastidiosa-RECA_XYLFT ---------------------KkralsvAlsqIEKqfgkg
B Yersinia_pestis-RECA ---------------------KqkalaaAlgqIEKqfgkg
B Yersinia_pestis-RECA_YERPS ---------------------KqkalaaAlgqIEKqfgkg
B Mycobacterium_tuberculosis-RECA ---------------------RekalelAvaqIEKsygkg
B Mycobacterium_tuberculosis-RECA_M ---------------------RekalelAmaqIEKsygkg
B Neisseria_meningitidis-RECA ---------------------KskalaaAlaqIEKsfgkg
B Neisseria_meningitidis-RECA_NEIMA ---------------------KskalaaAlaqIEKsfgkg
B Neisseria_meningitidis-RECA_VAR ---------------------KskalaaAlaqIEKsfgkg
B Xanthomonas_vasicola-RECA_XANAC ---------------------KkralsaAlsqIEKqfgkg
B Xanthomonas_vasicola-RECA_XANCP ---------------------KkralsaAlsqIEKqfgkg
B Xanthomonas_vasicola-YP_201580 ---------------------KkralaaAlsqIEKqfgkg
B Pseudomonas_aeruginosa-Q48F94 ---------------------KkkalaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA ---------------------KkralaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA_PSEF5 ---------------------KkkalaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA_PSEFL ---------------------KkkalaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA_PSEPK ---------------------KkralaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA_PSEPU ---------------------KkralaaAlgqIERqfgkg
B Pseudomonas_aeruginosa-RECA_PSESM ---------------------KkkalaaAlgqIERqfgkg
============================================================================
B DEINOCOCCUS_RADIODURANS -------------------------rskAiEtamsqieka
B Deinococcus_geothermalis -------------------------rlkAiEtamtqieka
B Thermus_aquaticus-RECA -------------------------krkslEnalKtieke
B Thermus_aquaticus-RECA_THET2 -------------------------krkAlEnalKaieke
B Thermus_aquaticus-RECA_THET8 -------------------------krkAlEnalKaieke
B Thermus_aquaticus-RECA_THETH -------------------------krkAlEnalKaieke
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxkxxxxxxaxkivekxxxxx
250 260 270 280
----:----|----:----|----:----|----:----|
Consensus xixfmxgxxxxxqqxdIxxIsTGSxxLDxlLxxGGIexGx
============================================================================
A PYROCOCCUS_FURIOSUS lgtFMradeylkKRatIgrISTGSksLDkLL-gGGIEtqa
A Archaeoglobus_fulgidus iggFesGdkvleRRrsVkkITTGSkdLDeLL-gGGVEtqa
A Pyrococcus_abyssi lgtFMradeylkKResIgrISTGSksLDkLL-gGGIEtqa
============================================================================
A METHANOCOCCUS_VOLTAE dLgFksGidllkQRstVwkLSTsSseLDsVL-gGGLEsqs
A Methanococcus_jannaschii nLgFksGtevlsQRkNIwkLSTGSknLDeIL-gGGLEsqs
A Methanococcus_maripaludis dLgFksGvellkQRqsVwrLSTGSteLDtVL-aGGIEsqs
============================================================================
A SULFOLOBUS_SOLFATARICUS dIrFktalevkkERmNVkkISTGSqaLDgLL-aGGIEtrt
A Desulfurococcus_amylolyticus gItFktarevkqERsNIgkITTGSksLDeLL-gGGVEtkt
A Sulfolobus_acidocaldarius dIrFktalevkkERmNtkkITTGSqaLDgLL-gGGIEtrt
A Sulfolobus_tokodaii dIrFktalevkkERiNtkkITTGSqaLDgLL-gGGIEtrt
A Aeropyrum_pernix-RADA nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_OH1 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_OH2 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_OH3 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_TB1 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_TB2 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
A Aeropyrum_pernix-RADA_VAR_TB6 nIdFktaydlkiEsmNIkkITTGSrnLDeLL-gGGIEtkt
============================================================================
* HUMAN pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* S_CEREVISIAE pMgFVtaadfhmRRsELicLTTGSknLDtLL-gGGVEtGs
* Apis_mellifera vMgFksateihqtRsNIvfVTTGSseLDrLL-gGGIEtGs
* Aspergillus_flavus pMgFttatemhaRRsELisITTGSkqLDtLL-gGGIEtGs
* Aspergillus_fumigatus pMgFttatemhaRRsELisITTGSkqLDtLL-gGGIEtGs
* Bovine pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* C_elegans qMgFttGaevhvKRsqLvqIrTGSasLDrLL-gGGIEtGs
* Candida_albicans pLgFttasefhsRRsELicLTTGSkqLDtLL-gGGVEtGs
* Candida_glabrata pMgFVtaadfhmRRsEMicLTTGSknLDtLL-gGGIEtGs
* Canis_lupus pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Chaetomium_globosum pMgFttatemhqRRsELisITTGSkqLDtLL-aGGIEtGs
* Coccidioides_immitis pMgFttatemhaRRaDLicITTGSrqLDtLL-aGGVEtGs
* Coprinus_cinereus pLgFqsatevhaRRsELvhITTGSkqLDaLL-gGGIEtGa
* Cricetulus_griseus pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Cryptococcus_neoformans pMgFttateihsRRsELvhITTGStgLDtIL-gGGIEtGa
* Danio_rerio pMgFttatefhqRRaEIiqISTGSkeLDkLL-qGGIEtGs
* Debaryomyces_hansenii pLgFttasefhsRRsELicITTGSkqLDtLL-gGGIEtGs
* D_melanogaster pLgFLsartfyqmRaDVvqLSTGSkeLDkLL-gGGIEtGs
* D_pseudoobscura pLgFLsartfhqmRaDVvmLTTGSkeLDkLL-gGGIEtGs
* Emericella_nidulans pMgFttatemhaRRsELisITTGSkqLDtLL-gGGIEtGs
* Encephalitozoon_cuniculi pMgFttasayhqRRsELvyLTTGSseVDkLL-sGGfEsGs
* Eremothecium_gossypii pMgFVtaadfhlRRaEMicLTTGSknLDtLL-gGGIEtGs
* Chicken pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Gibberella_zeae pMgFttatemhqRRsELisITTGSknLDtLL-aGGIEtGs
* Kluyveromyces_lactis pMgFVtaadfhlRRnEMicLTTGSknLDtLL-gGGIEtGs
* Mouse pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Neurospora_crassa pMgFttatemhqRRsELisITTGSknLDtLL-aGGIEtGs
* Rabbit pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Pichia_angusta pLgFttatefhqRRsELicLTTGSkqLDtLL-gGGIEtGa
* Rat pMgFttatefhqRRsEIiqITTGSkeLDkLL-qGGIEtGs
* Schizosaccharomyces_pombe pMgFttateyhiRRsELitITTGSkqLDtLL-qGGVEtGs
* Strongylocentrotus_purpuratus pMgFttatqfhqQRsEIiqVTTGSkeLDkLL-qGGIEtGs
* Tetraodon_nigroviridis pMgFttatefhqRRaEIiqISTGSkeLDkLL-qGGIEtGs
* Tribolium_castaneum nMgFttatdihrRRaNIiqLTTGSkeLDkLL-gGGIEtGs
* Ustilago_maydis pMgFttatefhaRRnELisITTGSknLDaIL-gGGMEtGs
* X_tropicalis pMgFttatefhqRRsEIiqISTGSkeLDkLL-qGGIEtGs
* Yarrowia_lipolytica pLgFttasdvhqtRsgLitLTTGSsqLDtLL-gGGIEtGa
* X_laevis-RA51A pMgFttatefhqRRsEIiqISTGSkeLDkLL-qGGVEtGs
* X_laevis-RA51B pMgFttatefhqRRsEIiqIgTGSkeLDkLL-qGGIEtGs
Cryptosporidium_hominis aMgFcsGteyleaRtNLikfTTGSsqLDrLL-qGGIEtGs
Cryptosporidium_parvum aMgFcsGteyleaRtNLikfTTGSsqLDrLL-qGGIEtGs
Dictyostelium_discoideum fMgFrtatdinkaRaEIiqITTGSkefDsLL-dGGIEsGs
Entamoeba_histolytica pLaFtnaaelnnlRkEtirITTGSreLDkLL-cGGfEtGs
Leishmania_donovani pMgFtsavayheaRkEIimVTTGSreVDkLL-gGGIEtGs
Leishmania_tropica pMgFtsavayheaRkEIimVTTGSreVDkLL-gGGIEtGs
Plasmodium_berghei nsgFcnaidyhdaRqNLikfTTGSkqLDaLL-kGGIEtGg
Plasmodium_falciparum nsgFcnaidyhdaRqNLikfTTGSkqLDaLL-kGGIEtGg
Tetrahymena_thermophila pndFqtaaeyyvKRqsVinLTTGSteLDkLL-gGGfEtGs
Theileria_annulata hLgFcsGqdyleaRgNLikfTTGSsqLDkLL-qGGVEtGs
Theileria_parva hLgFcsGqdyleaRgNLikfTTGSaqLDkLL-qGGVEtGs
Trypanosoma_brucei pMgFtratvfqeQRkEtimVTTGSreVDkLL-gGGIEvGs
Trypanosoma_cruzi pMgFtsavvyheaRkEIimVTTGSreVDkLL-gGGIEtGg
P Arabidopsis_thaliana pLgFtsasqlhaQRqEIiqITSGSreLDkVL-eGGIEtGs
P Oryza_sativa pLgFtsasqlhaQRlEIiqVTTGSreLDkIL-dGGIEtGs
P Maize-R51A1 pLgFtsasqlhaQRlEIiqVTTGSreLDkIL-eGGIEtGs
P Maize-R51A2 pLgFtsasqlhaQRlEIiqLTTGSreLDqIL-dGGIEtGs
============================================================================
B E_COLI sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B MYCOBACTERIUM_SMEGMATIS sVmrL-Ge-ev-RQ-pIsvIpTGSisLDvaLgiGGLprGr
B MYCOBACTERIUM_TUBERCULOSIS sVmrL-Gd-em-RQ-pIsvIpTGSiaLDvaLgiGGLprGr
B Acinetobacter_calcoaceticus tVmrL-Gd-nt-vQ-aVeaVSTGSltLDiaLgiGGLpkGr
B Actinobacillus_pleuropneumoniae sImrL-Gd-tq-al-DIeaVSTGSigLDaaLgiGGLpmGr
B Actinobacillus_succinogenes aImkL-Gd-rp-dm-DVesVSTGSigLDvaLgiGGLpmGr
B Actinomyces_bovis aVmrL-Ge-ea-RQ-pIsvIpTGSiaLDvaLgiGGLprGr
B Azotobacter_vinelandii aVmrM-Gd-he-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Bacillus_clausii sImkL-Ge-qa-EQ-rVstVSSGTlaLDiaLgvGGypkGr
B Bacillus_halodurans sImkL-Ge-qa-EQ-rVstISSGalaLDiaLgvGGyprGr
B Bacillus_licheniformis sImkL-Ge-qt-Et-rIstVpSGSlaLDaaLgvGGyprGr
B Bacillus_megaterium sImkL-Ge-qt-EK-rIstIpSGSlaLDiaLgvGGyprGr
B Bacillus_subtilis sImkL-Ge-kt-dt-rIstVpSGSlaLDtaLgiGGyprGr
B Bordetella_pertussis sImry-Gd-nevEh-DIqvVSTGSlgLDiaLgvGGLprGr
B Burkholderia_fungorum sVmrL-Ga-ge-vieDIqvVSTGSlgLDiaLgvGGLprGr
B Chromobacterium_violaceum sImrM-sdnqi-tE-NLqvISTGSltLDlaLgvGGLprGr
B Clostridium_acetobutylicum aImkL-Ge-qd-il-NIdaISTGclsLDiaLgiGGVprGr
B Clostridium_thermocellum aVmkL-Ge-nt-hm-NIetIpTGalgLDiaLgvGGVprGr
B Colwellia_psychrerythraea sImkL-Gd-nt-tm-DVetISTGSlgLDiaLgaGGLpmGr
B Corynebacterium_efficiens aVmrL-Gd-en-Rp-pIqvISSGNtaLDiaLgiGGfprGr
B Desulfotalea_psychrophila sImrL-Ge-qa-lE-aIpvISTGalsLDiaLgvGGLpkGr
B Enterococcus_faecalis sImkL-Ge-ka-dQ-kIstIpSGSlaLDvaLgvGGyprGr
B Haemophilus_ducreyi sImrL-Gd-tq-al-DIeaVSTGSigLDaaLgiGGLpmGr
B Haemophilus_influenzae sImkL-Gd-tk-tl-DVesISTGSlgLDvaLgiGGLpmGr
B Histophilus_somni aImkL-Ge-tq-Kl-DIeaISTGSlsLDvaLgiGGLpmGr
B Kineococcus_radiotolerans sVmrL-Gd-ev-Rp-pIevIpTGSisLDvaLgiGGLprGr
B Leifsonia_xyli sVmrL-Gs-de-Ra-pVevVpTGSiaLDvaLgiGGLprGr
B Mannheimia_succiniciproducens aImkL-Gd-tq-al-DVesISTGSigLDvaLgiGGLpmGr
B Nitrosomonas_europaea sImrL-Gdsdv-aK-DIqvVSTGSlgLDiaLgvGGLprGr
B Nitrosomonas_eutropha sImrL-Gdsdv-aK-DIqvVSTGSlsLDiaLgvGGLprGr
B Oceanobacillus_iheyensis sImkM-Ge-ne-ip-kIatIpSGSlaLDvaLgiGGyprGr
B Pasteurella_multocida sImkL-Gd-tq-al-DVeaVSTGSlsLDvaLgiGGLpmGr
B Photobacterium_profundum sImkL-Gd-nr-tm-DIetISTGSlsLDiaLgaGGLpmGr
B Photorhabdus_luminescens sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Proteus_mirabilis sImrL-Ge-dr-sm-NVetISTGSlsLDvaLgaGGLprGr
B Pseudomonas_cepacia sImrM-Gdgea-aE-DIqvVSTGSlgLDiaLgvGGLprGr
B Pseudomonas_pseudomallei sImrL-Gd-ge-aveDIqvVSTGSlgLDiaLgvGGLprGr
B Shewanella_amazonensis sImkL-Ge-dr-sm-DVetISTGSlsLDvaLgaGGLpmGr
B Shewanella_putrefaciens sImkL-Ge-dr-sm-DVetISTGSlsLDvaLgaGGLpmGr
B Streptomyces_avermitilis aVmrL-Ge-rp-nE-pIevIpTGStaLDvaLgvGGLprGr
B Vibrio_alginolyticus sImrL-Gd-nr-am-DVetISTGSlsLDiaLgaGGLpmGr
B Vibrio_angustum sImkL-Gd-nr-tm-DIetISTGSlsLDiaLgaGGLpmGr
B Vibrio_cholerae sImrL-Gd-nr-am-DVetISTGSlsLDiaLgaGGLpmGr
B Vibrio_fischeri sImkL-Gd-nr-tm-DVetVSTGSlsLDiaLgaGGLpmGr
B Vibrio_parahaemolyticus sImrL-Gd-nr-am-DVetISTGSlsLDiaLgaGGLpmGr
B Vibrio_splendidus sImrL-Gd-nr-tm-DVetISTGSlsLDiaLgaGGLpmGr
B Vibrio_vulnificus sImrL-Gd-nr-am-DVetISTGSlsLDiaLgaGGLpmGr
B Yersinia_enterocolitica sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Cupriavidus_metallidurans-Q1LR74 sImrL-Gd-geiEQ-DIqvVSTGSlgLDiaLgvGGLprGr
B Cupriavidus_metallidurans-RECA sImrL-Gd-geiEQ-DIqvVSTGSlgLDiaLgvGGLprGr
B Erwinia_carotovora-RECA sImrL-Ge-dr-sm-NVetISTGSlsLDvaLgaGGLprGr
B Erwinia_carotovora-RECA_ERWCT sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Listeria_monocytogenes-RECA sImkL-Ge-hs-dQ-NIstISSGSlaLDiaLgvGGyprGr
B Listeria_monocytogenes-RECA_LISMF sImkL-Ge-hs-dQ-NIstISSGSlaLDiaLgvGGyprGr
B Neisseria_gonorrhoeae-RECA aImkMdGs-qq-EE-NLevISTGSlgLDlaLgvGGLprGr
B Neisseria_gonorrhoeae-RECA_VAR aImkMdGs-qq-EE-NLevISTGSlgLDlaLgvGGLrrGr
B Salmonella_typhi-RECA sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Salmonella_typhi-RECA_SALPA sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Streptomyces_coelicolor-RECA aVmrM-Gd-rt-nE-pIevIpTGStaLDvaLgvGGIprGr
B Streptomyces_coelicolor-RECA_STRL aVmrM-Gd-rt-nE-pIevIpTGStaLDvaLgvGGIprGr
B Xylella_fastidiosa-RECA sVmrM-Gd-rv-iE-aVeaIpTGSlmLDlaLgiGGLpkGr
B Xylella_fastidiosa-RECA_XYLFT sVmrM-Gd-rv-iE-aVeaIpTGSlmLDlaLgiGGLpkGr
B Yersinia_pestis-RECA sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Yersinia_pestis-RECA_YERPS sImrL-Ge-dr-sm-DVetISTGSlsLDiaLgaGGLpmGr
B Mycobacterium_tuberculosis-RECA sVmrL-Gd-ea-RQ-pIsvIpTGSiaLDvaLgiGGLprGr
B Mycobacterium_tuberculosis-RECA_M sVmrL-Gd-em-RQ-pIsvIpTGSiaLDvaLgiGGLprGr
B Neisseria_meningitidis-RECA aImkMdGs-qq-EE-NLevISTGSlgLDlaLgvGGLprGr
B Neisseria_meningitidis-RECA_NEIMA aImkMdGs-qq-EE-NLevISTGSlgLDlaLgvGGLprGr
B Neisseria_meningitidis-RECA_VAR aImkMdGs-qq-EE-NLevISTGSlgLDlaLgvGGLprGr
B Xanthomonas_vasicola-RECA_XANAC sVmrM-Gd-rv-iE-aVevIpTGSlmLDiaLgiGGLpkGr
B Xanthomonas_vasicola-RECA_XANCP sVmrM-Gd-rv-iE-aVevIpTGSlmLDiaLgiGGLpkGr
B Xanthomonas_vasicola-YP_201580 sVmrM-Gd-rv-iE-aVevIpTGSlmLDiaLgtGGLpkGr
B Pseudomonas_aeruginosa-Q48F94 aVmrM-Gd-hd-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA aVmrM-Gd-he-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA_PSEF5 aVmrM-Gd-hd-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA_PSEFL aVmrM-Gd-hd-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA_PSEPK aVmrM-Gd-he-RQ-gIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA_PSEPU aVmrM-Gd-he-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
B Pseudomonas_aeruginosa-RECA_PSESM aVmrM-Gd-hd-RQ-aIpaISTGSlgLDiaLgiGGLpkGr
============================================================================
B DEINOCOCCUS_RADIODURANS fgkgsimklgaesKlDVqvVSTGSlsLDlaLgvGGIprGr
B Deinococcus_geothermalis fgkgsimrlgaesKlDVqaVSTGSlsLDlaLgvGGIprGr
B Thermus_aquaticus-RECA fgkgavmrlgempKlqVdvIpTGSlgLDlaLgiGGIprGr
B Thermus_aquaticus-RECA_THET2 fgkgavmrlgempKqqVdvIpTGSlaLDlaLgiGGIprGr
B Thermus_aquaticus-RECA_THET8 fgkgavmrlgempKqqVdvIpTGSlaLDlaLgiGGIprGr
B Thermus_aquaticus-RECA_THETH fgkgavmrlgempKqqVdvIpTGSlaLDlaLgiGGIprGr
============================================================================
Consensus xixfmxgxxxxxqqxdIxxIsTGSxxLDxlLxxGGIexGx
290 300 310 320
----:----|----:----|----:----|----:----|
Consensus ItELFxxxxxxxxxxxxxxxxxGxfxSGKTqIxhslxvsx
============================================================================
A PYROCOCCUS_FURIOSUS ITEVF-----------------GeFgSGKTQLaHTLaVmv
A Archaeoglobus_fulgidus ITEfF-----------------GeFgSGKTQIcHqLaVNv
A Pyrococcus_abyssi ITEVF-----------------GeFgSGKTQLaHTLaVmv
============================================================================
A METHANOCOCCUS_VOLTAE VTEfa-----------------GvFgSGKTQImHqscVNl
A Methanococcus_jannaschii VTEfa-----------------GmFgSGKTQIaHqacVNl
A Methanococcus_maripaludis VTEfa-----------------GmFgSGKTQImHqtcVNl
============================================================================
A SULFOLOBUS_SOLFATARICUS MTEfF-----------------GeFgSGKTQLcHqLsVNv
A Desulfurococcus_amylolyticus ITEfF-----------------GeYgSGKTQIcHqLsVNv
A Sulfolobus_acidocaldarius MTEfF-----------------GeFgSGKTQLcHqIsISv
A Sulfolobus_tokodaii MTELF-----------------GeFgSGKTQLcHqLsVNv
A Aeropyrum_pernix-RADA ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_OH1 ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_OH2 ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_OH3 ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_TB1 ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_TB2 ITELF-----------------GeFgSGKTQIcHqLsVNv
A Aeropyrum_pernix-RADA_VAR_TB6 ITELF-----------------GeFgSGKTQIcHqLsVNv
============================================================================
* HUMAN ITEMF-----------------GeFrTGKTQIcHTLaVTc
* S_CEREVISIAE ITELF-----------------GeFrTGKSQLcHTLaVTc
* Apis_mellifera ITEIF-----------------GeFrSGKTQLcHTLaVNc
* Aspergillus_flavus ITEIF-----------------GeFrTGKSQIcHTLaVTc
* Aspergillus_fumigatus ITEIF-----------------GeFrTGKSQIcHTLaVTc
* Bovine ITEMF-----------------GeFrTGKTQIcHTLaVTc
* C_elegans ITEVY-----------------GeYrTGKTQLcHSLaVlc
* Candida_albicans ITEVF-----------------GeFrTGKSQLcHTLaVTc
* Candida_glabrata ITELF-----------------GeFrTGKSQLcHSLaVTc
* Canis_lupus ITEMF-----------------GeFrTGKTQIcHTLaVTc
* Chaetomium_globosum VTELF-----------------GeFrTGKSQIcHTLaVTc
* Coccidioides_immitis ITEIF-----------------GeFrTGKSQIcHTLaVTc
* Coprinus_cinereus ITELF-----------------GeFrTGKSQIcHTLaVTc
* Cricetulus_griseus ITEMF-----------------GeFrTGKTQIcHTLaVTc
* Cryptococcus_neoformans ITELYgkslrslvaspiantstGeFrTGKSQLcHTLaVTc
* Danio_rerio ITEMF-----------------GeFrTGKTQLcHTLaVTc
* Debaryomyces_hansenii ITEVF-----------------GeFrTGKSQLcHTLaVTc
* D_melanogaster ITEIF-----------------GeFrcGKTQLcHTLaVTc
* D_pseudoobscura ITEIF-----------------GeFrcGKTQIcHTLaVTc
* Emericella_nidulans ITEIF-----------------GeFrTGKSQIcHTLaVTc
* Encephalitozoon_cuniculi ITEIF-----------------GeFrTGKTQLcHTVaVTc
* Eremothecium_gossypii ITELF-----------------GeFrTGKSQLcHTLaVTc
* Chicken ITELF-----------------GeFrTGKTQLcHTLaVTc
* Gibberella_zeae VTELF-----------------GeFrTGKSQIcHTLaVTc
* Kluyveromyces_lactis ITELF-----------------GeFrTGKSQLcHTLaVTc
* Mouse ITEMF-----------------GeFrTGKTQIcHTLaVTc
* Neurospora_crassa VTEIF-----------------GeFrTGKSQIcHTLaVTc
* Rabbit ITEMF-----------------GeFrTGKTQIcHTLaVTc
* Pichia_angusta ITEVF-----------------GeFrTGKSQLcHTLaVTc
* Rat ITEMF-----------------GeFrTGKTQIcHTLaVTc
* Schizosaccharomyces_pombe ITELF-----------------GeFrTGKSQIcHTLaVTc
* Strongylocentrotus_purpuratus ITEIF-----------------GeFrTGKTQLcHTMaVTc
* Tetraodon_nigroviridis ITEMF-----------------GeFrTGKTQLcHTLaVTc
* Tribolium_castaneum ITEIF-----------------GeFrTGKTQIcHTLaVTc
* Ustilago_maydis ITELY-----------------GeFrTGKSQLcHTLaVTc
* X_tropicalis ITEMF-----------------GeFrTGKTQLcHTLaVTc
* Yarrowia_lipolytica ITEMF-----------------GeFrTGKSQLcHTLaVTc
* X_laevis-RA51A ITEMF-----------------GeFrTGKTQLcHTLaVTc
* X_laevis-RA51B ITEMF-----------------GeFrTGKTQLcHTLaVTc
Cryptosporidium_hominis ITEIF-----------------GeFrTGKTQLcHTLaVTc
Cryptosporidium_parvum ITEIF-----------------GeFrTGKTQLcHTLaVTc
Dictyostelium_discoideum ITEIF-----------------GeFrTGKTQIcHTLcVTc
Entamoeba_histolytica ITELF-----------------GeFrTGKTQLcHqLcVTc
Leishmania_donovani ITELF-----------------GeFrTGKTQLcHTLcVTc
Leishmania_tropica ITELF-----------------GeFrTGKTQLcHTLcVTc
Plasmodium_berghei ITELF-----------------GeFrTGKSQLcHTLaITc
Plasmodium_falciparum ITELF-----------------GeFrTGKSQLcHTLaITc
Tetrahymena_thermophila LTEIF-----------------GeFrTGKTQIcHTLcITc
Theileria_annulata ITEIi-----------------GeFkTGKSQLcHTLaVTc
Theileria_parva ITEIi-----------------GeFkTGKSQLcHTLaVTc
Trypanosoma_brucei ITELF-----------------GeFrTGKTQLcHTLcVTc
Trypanosoma_cruzi ITELF-----------------GeFrTGKTQLcHTLcVTc
P Arabidopsis_thaliana ITELY-----------------GeFrSGKTQLcHTLcVTc
P Oryza_sativa ITEIY-----------------GeFrSGKTQLcHTLcVTc
P Maize-R51A1 ITEIY-----------------GeFrSGKTQLcHTpcVTc
P Maize-R51A2 ITEMY-----------------GeFrSGKTQLcHTLcVTc
============================================================================
B E_COLI IvEIY-----------------GpesSGKTtLtlqViaaa
B MYCOBACTERIUM_SMEGMATIS ViEIY-----------------GpesSGKTtValhavaNa
B MYCOBACTERIUM_TUBERCULOSIS VvEIY-----------------GpesSGKTtValhavaNa
B Acinetobacter_calcoaceticus IvEIY-----------------GpesSGKTtMtlqaiaqc
B Actinobacillus_pleuropneumoniae IvEIY-----------------GpesSGKTtLtlSViaqa
B Actinobacillus_succinogenes IvEIF-----------------GpesSGKTtLtlSViaqa
B Actinomyces_bovis IvEIY-----------------GpesSGKTtValhavaNa
B Azotobacter_vinelandii IvEIY-----------------GpesSGKTtLtlStiaea
B Bacillus_clausii ViEVY-----------------GpesSGKTtValhaiaev
B Bacillus_halodurans ViEVY-----------------GpesSGKTtValhaiaev
B Bacillus_licheniformis IiEVY-----------------GpesSGKTtValhaiaev
B Bacillus_megaterium VvEVY-----------------GpesSGKTtValhaiaev
B Bacillus_subtilis IiEVY-----------------GpesSGKTtValhaiaev
B Bordetella_pertussis ViEVY-----------------GpesSGKTtLtlqViaem
B Burkholderia_fungorum VvEIY-----------------GpesSGKTtLtlqViaem
B Chromobacterium_violaceum VvEIY-----------------GpesSGKTtLclqavaea
B Clostridium_acetobutylicum VvEIY-----------------GpesSGKTtValhIlaea
B Clostridium_thermocellum IvEIF-----------------GpesSGKTtValhIiaea
B Colwellia_psychrerythraea VvEIY-----------------GpesSGKTtLtleViaea
B Corynebacterium_efficiens IvEVY-----------------GpesSGKTtValhaiaqa
B Desulfotalea_psychrophila MTEIY-----------------GpesSGKTtLalhVvaea
B Enterococcus_faecalis IiEVY-----------------GpesSGKTtVslhaiaev
B Haemophilus_ducreyi IvEIY-----------------GpesSGKTtLtlSViaqa
B Haemophilus_influenzae IvEIF-----------------GpesSGKTtLtlSViaqa
B Histophilus_somni IvEIF-----------------GpesSGKTtLtlSViaqa
B Kineococcus_radiotolerans VvEIY-----------------GpesSGKTtValhavaSa
B Leifsonia_xyli IvEIY-----------------GpesSGKTtLtlhaiaNa
B Mannheimia_succiniciproducens VvEIF-----------------GpesSGKTtLtlSViaqa
B Nitrosomonas_europaea IiEIY-----------------GpesSGKTtLtlqaiaem
B Nitrosomonas_eutropha IiEIY-----------------GpesSGKTtLtlqViaem
B Oceanobacillus_iheyensis VvEIY-----------------GpesSGKTtValhaiaea
B Pasteurella_multocida IvEIF-----------------GpesSGKTtLtlSViaqa
B Photobacterium_profundum IvEIY-----------------GpesSGKTtLtletiaaa
B Photorhabdus_luminescens IvEIY-----------------GpesSGKTtLtlqViaaa
B Proteus_mirabilis IvEIY-----------------GpesSGKTtLtlqViaSa
B Pseudomonas_cepacia VvEIY-----------------GpesSGKTtLtlqViael
B Pseudomonas_pseudomallei VvEIY-----------------GpesSGKTtLtlqViaem
B Shewanella_amazonensis IvEIY-----------------GpesSGKTtLtleViaaa
B Shewanella_putrefaciens IvEIY-----------------GpesSGKTtLtleViaaa
B Streptomyces_avermitilis VvEVY-----------------GpesSGKTtLtlhavaNa
B Vibrio_alginolyticus IvEIY-----------------GpesSGKTtLtleLiaaa
B Vibrio_angustum IvEIY-----------------GpesSGKTtLtletiaaa
B Vibrio_cholerae IvEIF-----------------GpesSGKTtLtleLiaaa
B Vibrio_fischeri IvEIF-----------------GpesSGKTtLtleLiaaa
B Vibrio_parahaemolyticus IvEIY-----------------GpesSGKTtLtleLiaaa
B Vibrio_splendidus IvEVY-----------------GpesSGKTtLtleLiaaa
B Vibrio_vulnificus IvEIF-----------------GpesSGKTtLtleLiaaa
B Yersinia_enterocolitica IvEIY-----------------GpesSGKTtLtlqViaaa
B Cupriavidus_metallidurans-Q1LR74 VvEIY-----------------GpesSGKTtLtlqVvaem
B Cupriavidus_metallidurans-RECA VvEIY-----------------GpesSGKTtLtlqVvaem
B Erwinia_carotovora-RECA IvEIY-----------------GpesyGKTtLtlqViaaa
B Erwinia_carotovora-RECA_ERWCT IvEIY-----------------GpesSGKTtLtlqViaaa
B Listeria_monocytogenes-RECA IiEVY-----------------GpesSGKTtValhaiaev
B Listeria_monocytogenes-RECA_LISMF IiEVY-----------------GpesSGKTtValhaiaev
B Neisseria_gonorrhoeae-RECA IvEIF-----------------GpesSGKTtLcleavaqc
B Neisseria_gonorrhoeae-RECA_VAR IvEIF-----------------GpesSGKTtLcleavaqc
B Salmonella_typhi-RECA IvEIY-----------------GpesSGKTtLtlqViaaa
B Salmonella_typhi-RECA_SALPA IvEIY-----------------GpesSGKTtLtlqViaaa
B Streptomyces_coelicolor-RECA VvEVY-----------------GpesSGKTtLtlhavaNa
B Streptomyces_coelicolor-RECA_STRL VvEVY-----------------GpesSGKTtLtlhavaNa
B Xylella_fastidiosa-RECA VvEIY-----------------GpesSGKTtLtlqaiaqc
B Xylella_fastidiosa-RECA_XYLFT VvEIY-----------------GpesSGKTtLtlqaiaqc
B Yersinia_pestis-RECA IvEIY-----------------GpesSGKTtLtlqViaaa
B Yersinia_pestis-RECA_YERPS IvEIY-----------------GpesSGKTtLtlqViaaa
B Mycobacterium_tuberculosis-RECA ViEIY-----------------GpesSGKTtValhavaNa
B Mycobacterium_tuberculosis-RECA_M VvEIY-----------------GpesSGKTtValhavaNa
B Neisseria_meningitidis-RECA IvEIF-----------------GpesSGKTtLcleavaqc
B Neisseria_meningitidis-RECA_NEIMA IvEIF-----------------GpesSGKTtLcleavaqc
B Neisseria_meningitidis-RECA_VAR IvEIF-----------------GpesSGKTtLcleavaqc
B Xanthomonas_vasicola-RECA_XANAC VvEIY-----------------GpesSGKTtLtlqaiaec
B Xanthomonas_vasicola-RECA_XANCP VvEIY-----------------GpesSGKTtLtlqaiaec
B Xanthomonas_vasicola-YP_201580 VvEIY-----------------GpesSGKTtLtlqaiaqc
B Pseudomonas_aeruginosa-Q48F94 IvEIY-----------------GpesSGKTtLtlSViaqa
B Pseudomonas_aeruginosa-RECA IvEIY-----------------GpesSGKTtLtlSViaea
B Pseudomonas_aeruginosa-RECA_PSEF5 IvEIY-----------------GpesSGKTtLtlSViaqa
B Pseudomonas_aeruginosa-RECA_PSEFL IvEIY-----------------GpesSGKTtLtlSViaqa
B Pseudomonas_aeruginosa-RECA_PSEPK IvEIY-----------------GpesSGKTtLtlSViaea
B Pseudomonas_aeruginosa-RECA_PSEPU IvEIY-----------------GpesSGKTtLtlSViaea
B Pseudomonas_aeruginosa-RECA_PSESM IvEIY-----------------GpesSGKTtLtlSViaqa
============================================================================
B DEINOCOCCUS_RADIODURANS ITEIY-----------------GpesgGKTtLalaIvaqa
B Deinococcus_geothermalis ITEIY-----------------GpesgGKTtLalSViaqa
B Thermus_aquaticus-RECA VTEIF-----------------GpesgGKTtLalTIiaqa
B Thermus_aquaticus-RECA_THET2 IvEIY-----------------GpesgGKTtLalTIiaqa
B Thermus_aquaticus-RECA_THET8 IvEIY-----------------GpesgGKTtLalTIiaqa
B Thermus_aquaticus-RECA_THETH IvEIY-----------------GpesgGKTtLalTIiaqa
============================================================================
Consensus ItELFxxxxxxxxxxxxxxxxxGxfxSGKTqIxhslxvsx
330 340 350 360
----:----|----:----|----:----|----:----|
Consensus QxxxxxxxxxxxxxxxxxxxxxgxcvFVDxEntfrPerix
============================================================================
A PYROCOCCUS_FURIOSUS Qlppeegg------------lnGsvIWIDtENTFRPERIr
A Archaeoglobus_fulgidus Qlpedegg------------leGsvIiIDtENTFRPERIi
A Pyrococcus_abyssi Qlppeegg------------lnGsvIWIDtENTFRPERIr
============================================================================
A METHANOCOCCUS_VOLTAE Qnp--eflfydeeavskgevaqpkaVYIDtEgTFRPERIm
A Methanococcus_jannaschii Qcp--erivad-daikdeilnepkaVYIDtEgTFRPERIv
A Methanococcus_maripaludis Qir--ekifadlegvveeeleapkaVYIDtEgTFRPERVv
============================================================================
A SULFOLOBUS_SOLFATARICUS Qlppekgg------------lsGkaVYIDtEgTFRwERIe
A Desulfurococcus_amylolyticus Qltpekgg------------lnGraVYIDtEgTFRwERIe
A Sulfolobus_acidocaldarius Qlpqekgg------------lnGkaVYIDtEgTFRwERIe
A Sulfolobus_tokodaii Qlplekgg------------lgGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA Qlpedkgg------------leGkaVYVDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_OH1 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_OH2 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_OH3 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_TB1 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_TB2 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
A Aeropyrum_pernix-RADA_VAR_TB6 Qlpedkgg------------leGkaVYIDtEgTFRwERIe
============================================================================
* HUMAN Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* S_CEREVISIAE Qipldigg------------geGkCLYIDtEgTFRPvRLv
* Apis_mellifera Qlpidmgg------------aeGkCLYIDtEgTFRPERLi
* Aspergillus_flavus Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Aspergillus_fumigatus Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Bovine Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* C_elegans Qlpidmgg------------geGkCMYIDtnaTFRPERIi
* Candida_albicans Qlpidmgg------------geGkCLYIDtEgTFRPnRLv
* Candida_glabrata Qipldlgg------------geGkCLYIDtEgTFRPvRLv
* Canis_lupus Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Chaetomium_globosum Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Coccidioides_immitis Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Coprinus_cinereus Qlpvsmgg------------geGkCLYIDtEgTFRPvRLl
* Cricetulus_griseus Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Cryptococcus_neoformans Qlpvsmgg------------geGkCLYIDtEgTFRPvRMl
* Danio_rerio Qlpidqgg------------geGkaMYIDtEgTFRPERLl
* Debaryomyces_hansenii Qlpidmgg------------geGkCLYIDtEgTFRPvRLv
* D_melanogaster Qlpisqkg------------geGkCMYIDtENTFRPERLa
* D_pseudoobscura Qlpisqkg------------geGkCLYIDtESTFRtERLs
* Emericella_nidulans Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Encephalitozoon_cuniculi Qlppeqgg------------ggGkaMYIDtEgTFRsERLv
* Eremothecium_gossypii Qipldmgg------------geGkCLYIDtEgTFRPiRLv
* Chicken Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Gibberella_zeae Qlpfdmgg------------geGkCMYIDtEgTFRPvRLl
* Kluyveromyces_lactis Qipldmgg------------geGkCLYIDtEgTFRPiRLv
* Mouse Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Neurospora_crassa Qlpfdmgg------------geGkCLYIDtEgTFRPvRLl
* Rabbit Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Pichia_angusta Qlpidngg------------geGkCLYIDtEgTFRPiRLv
* Rat Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Schizosaccharomyces_pombe Qlpidmgg------------geGkCLYIDtEgTFRPvRLl
* Strongylocentrotus_purpuratus Qlpidngg------------geGkCLYIDtEgTFRPERLi
* Tetraodon_nigroviridis Qlpidqgg------------geGkaMYIDtEgTFRPERLl
* Tribolium_castaneum Qlalesgg------------geGkCLYIDtEgTFRPERLl
* Ustilago_maydis Qlpvdmgg------------geGkCLYIDtENTFRPtRLl
* X_tropicalis Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* Yarrowia_lipolytica Qlpidqgg------------geGkCLYIDtEgTFRPERLh
* X_laevis-RA51A Qlpidrgg------------geGkaMYIDtEgTFRPERLl
* X_laevis-RA51B Qlpidrgg------------geGkaMYIDtEgTFRPERLl
Cryptosporidium_hominis Qlpvehkg------------geGkCLWIDtEgTFRPERIv
Cryptosporidium_parvum Qlpvehkg------------geGkCLWIDtEgTFRPERIv
Dictyostelium_discoideum Qlgysqgg------------geGraLYIDtEgTFRPERLl
Entamoeba_histolytica Qlgiengg------------teGraIYIDtEgTFRPERLt
Leishmania_donovani Qlpisqgg------------aeGmaLYIDtEgTFRPERLv
Leishmania_tropica Qlpisqgg------------aeGmaLYIDtEgTFRPERLv
Plasmodium_berghei Qlpieqsg------------geGkCLWIDtEgTFRPERIv
Plasmodium_falciparum Qlpieqsg------------geGkCLWIDtEgTFRPERIv
Tetrahymena_thermophila Qlpkekgg------------geGkaMYIDtEgTFRPERLe
Theileria_annulata Qlpveqsg------------geGkCLWVDsEgTFRPERIv
Theileria_parva Qlpveqsg------------geGkCLWVDsEgTFRPERIv
Trypanosoma_brucei Qlplsqgg------------geGmaLYIDtEgTFRPERLv
Trypanosoma_cruzi Qlpisqgg------------aeGmaLYIDtEgTFRPERLv
P Arabidopsis_thaliana Qlpmdqgg------------geGkaMYIDaEgTFRPQRLl
P Oryza_sativa Qlpldqgg------------geGkaLYIDaEgTFRPQRLl
P Maize-R51A1 Qlpldqgg------------geGkaLYIDaEgTFRPQRLl
P Maize-R51A2 Qlpldqgg------------geGkaLYIDaEgTFRPQRIl
============================================================================
B E_COLI Qre------------------gktCaFIDaEHaldPiyar
B MYCOBACTERIUM_SMEGMATIS Qaa------------------gGiaaFIDaEHaldPEyak
B MYCOBACTERIUM_TUBERCULOSIS Qaa------------------gGvaaFIDaEHaldPEyak
B Acinetobacter_calcoaceticus Qka------------------gGtCaFIDaEHaldPQyar
B Actinobacillus_pleuropneumoniae Qks------------------gktCaFIDaEHaldPvyar
B Actinobacillus_succinogenes Qka------------------gkvCaFIDaEHaldPiyaa
B Actinomyces_bovis Qaa------------------gGvaaFIDaEHaldPDyar
B Azotobacter_vinelandii Qkq------------------gatCaFVDaEHaldPDyaa
B Bacillus_clausii Qrn------------------gGqaaFIDaEHaldPvyas
B Bacillus_halodurans Qrn------------------gGqaaFIDaEHaldPvyak
B Bacillus_licheniformis Qqq------------------gGqaaFIDaEHaldPvyaq
B Bacillus_megaterium Qqq------------------gGqaaFIDaEHaldPvyaq
B Bacillus_subtilis Qqq-------------------rtsaFIDaEHaldPvyaq
B Bordetella_pertussis Qkl------------------gGtCaFVDaEHaldvQyas
B Burkholderia_fungorum Qki------------------gGtaaFIDaEHaldiQyas
B Chromobacterium_violaceum Qkl------------------gGtCaYIDaENaldPvyaq
B Clostridium_acetobutylicum Qkk------------------gGaaaFIDaEHaldPQyar
B Clostridium_thermocellum Qka------------------gGeaaFIDaEHaldPvyak
B Colwellia_psychrerythraea Qrn------------------gkvCaFIDaEHaldPvyae
B Corynebacterium_efficiens Qka------------------gGiaaFIDaEHaldPDyar
B Desulfotalea_psychrophila Qkl------------------gGiaaFIDaEHaldtayae
B Enterococcus_faecalis Qrn------------------gGtaaFIDaEHaldPQyaz
B Haemophilus_ducreyi Qri------------------gktCaFIDaEHaldPvyar
B Haemophilus_influenzae Qka------------------gktCaFIDaEHaldPiyaa
B Histophilus_somni Qka------------------gktCaFIDaEHaldPiyaa
B Kineococcus_radiotolerans Qka------------------gGiaaFIDaEHaldPDyaa
B Leifsonia_xyli Qra------------------gGiaaFIDaEHaldPDyar
B Mannheimia_succiniciproducens Qka------------------gkvCaFIDaEHaldPiyaa
B Nitrosomonas_europaea Qkl------------------gGtaaFIDaEHaldPQyaq
B Nitrosomonas_eutropha Qkl------------------gGtaaFIDaEHaldPQyaq
B Oceanobacillus_iheyensis Qkq------------------gGqaaFIDaEHaldPvyak
B Pasteurella_multocida Qke------------------gktCaFIDaEHaldPiyaa
B Photobacterium_profundum Qrv------------------nktCaFIDaEHaldPiyaq
B Photorhabdus_luminescens Qre------------------gktCaFIDaEHaldPiyak
B Proteus_mirabilis Qre------------------gkiCaFIDaEHaldPiyaq
B Pseudomonas_cepacia Qkl------------------gGtaaFIDaEHaldvQyaa
B Pseudomonas_pseudomallei Qkl------------------gGtaaFIDaEHaldvQyas
B Shewanella_amazonensis Qre------------------gkvCaFIDaEHaldPvyar
B Shewanella_putrefaciens Qre------------------gktCaFIDaEHaldPiyak
B Streptomyces_avermitilis Qka------------------gGqvaFVDaEHaldPEyak
B Vibrio_alginolyticus Qre------------------gktCaFIDaEHaldPvyak
B Vibrio_angustum Qrk------------------gktCaFIDaEHaldPiyaq
B Vibrio_cholerae Qre------------------gktCaFIDaEHaldPvyak
B Vibrio_fischeri Qre------------------gktCaFIDaEHaldPvyak
B Vibrio_parahaemolyticus Qre------------------gktCaFIDaEHaldPvyak
B Vibrio_splendidus Qrv------------------gktCaFVDaEHaldPiyaq
B Vibrio_vulnificus Qre------------------gktCaFIDaEHaldPvyak
B Yersinia_enterocolitica Qre------------------gktCaFIDaEHaldPiyak
B Cupriavidus_metallidurans-Q1LR74 Qkl------------------gGtCaFIDaEHaldvQyag
B Cupriavidus_metallidurans-RECA Qkl------------------gGtCaFIDaEHaldvQyag
B Erwinia_carotovora-RECA Qre------------------gkiCaFIDaEHaldPiyaq
B Erwinia_carotovora-RECA_ERWCT Qre------------------gktCaFIDaEHaldPiyak
B Listeria_monocytogenes-RECA Qaq------------------gGtaaFIDaEHaldPayak
B Listeria_monocytogenes-RECA_LISMF Qaq------------------gGtaaFIDaEHaldPayak
B Neisseria_gonorrhoeae-RECA Qkn------------------gGvCaFVDaEHaFdPvyar
B Neisseria_gonorrhoeae-RECA_VAR Qkn------------------gGvCaFVDaEHaFdPvyar
B Salmonella_typhi-RECA Qre------------------gktCaFIDaEHaldPvyar
B Salmonella_typhi-RECA_SALPA Qre------------------gktCaFIDaEHaldPvyar
B Streptomyces_coelicolor-RECA Qka------------------gGqvaFVDaEHaldPEyak
B Streptomyces_coelicolor-RECA_STRL Qka------------------gGqvaFVDaEHaldPEyak
B Xylella_fastidiosa-RECA Qkk------------------gGtaaFIDaEHaldPiyag
B Xylella_fastidiosa-RECA_XYLFT Qkr------------------gGtaaFIDaEHaldPiyag
B Yersinia_pestis-RECA Qre------------------gktCaFIDaEHaldPiyak
B Yersinia_pestis-RECA_YERPS Qre------------------gktCaFIDaEHaldPiyak
B Mycobacterium_tuberculosis-RECA Qaa------------------gGvaaFIDaEHaldPDyak
B Mycobacterium_tuberculosis-RECA_M Qaa------------------gGvaaFIDaEHaldPEyak
B Neisseria_meningitidis-RECA Qkn------------------gGvCaFVDaEHaFdPvyar
B Neisseria_meningitidis-RECA_NEIMA Qkn------------------gGvCaFVDaEHaFdPvyar
B Neisseria_meningitidis-RECA_VAR Qkn------------------gGvCaFVDaEHaFdPvyar
B Xanthomonas_vasicola-RECA_XANAC Qkn------------------gGtaaFIDaEHaldPiyaa
B Xanthomonas_vasicola-RECA_XANCP Qkl------------------gGtaaFIDaEHaldPiyaa
B Xanthomonas_vasicola-YP_201580 Qkl------------------gGtaaFIDaEHaldPvyaa
B Pseudomonas_aeruginosa-Q48F94 Qkm------------------gatCaFVDaEHaldPEyag
B Pseudomonas_aeruginosa-RECA Qkq------------------gatCaFVDaEHaldPDyag
B Pseudomonas_aeruginosa-RECA_PSEF5 Qka------------------gatCaFVDaEHaldPEyag
B Pseudomonas_aeruginosa-RECA_PSEFL Qkm------------------gatCaFVDaEHaldPEyag
B Pseudomonas_aeruginosa-RECA_PSEPK Qkn------------------gatCaFVDaEHaldPEyag
B Pseudomonas_aeruginosa-RECA_PSEPU Qkn------------------gatCaFVDaEHaldPEyag
B Pseudomonas_aeruginosa-RECA_PSESM Qkm------------------gatCaFVDaEHaldPEyag
============================================================================
B DEINOCOCCUS_RADIODURANS Qka------------------gGtCaFIDaEHaldPvyar
B Deinococcus_geothermalis Qra------------------gGtCaFIDaEHaldPvyar
B Thermus_aquaticus-RECA Qkg------------------gGvaaFVDaEHaldPlyak
B Thermus_aquaticus-RECA_THET2 Qrr------------------gGvaaFVDaEHaldPlyaq
B Thermus_aquaticus-RECA_THET8 Qrr------------------gGvaaFVDaEHaldPlyaq
B Thermus_aquaticus-RECA_THETH Qrr------------------gGvaaFVDaEHaldPlyaq
============================================================================
Consensus QxxxxxxxxxxxxxxxxxxxxxgxcvFVDxEntfrPerix
370 380 390 400
----:----|----:----|----:----|----:----|
Consensus qMxxxxxxxxxxxxxxlxxxxxMedIxxxRxxnxDqxlqI
============================================================================
A PYROCOCCUS_FURIOSUS EIaqn---------rgLdpdevLKhIyvaRafNsNhqMlL
A Archaeoglobus_fulgidus QMaea---------kgLdgnevLKNIyvaQayNsNhqMlL
A Pyrococcus_abyssi EIakn---------rgLdpdevLKhIyvaRafNsNhqMlL
============================================================================
A METHANOCOCCUS_VOLTAE QMaeh---------agIdgqtvLDNtfvaRayNsDmqMlf
A Methanococcus_jannaschii QMaea---------lgLdgnevLnNIfvaRayNsDmqMly
A Methanococcus_maripaludis QMaeg---------agIdgqtvLDNtfvaRayNsDmqMlf
============================================================================
A SULFOLOBUS_SOLFATARICUS nMaka---------lgLdidnvMnNIyyiRaiNtDhqIaI
A Desulfurococcus_amylolyticus aMara---------lgLdpdkvMDNIyymRayNsDhqIaI
A Sulfolobus_acidocaldarius aMakg---------agLesdiaMnNIyymRaiNsDhqMaI
A Sulfolobus_tokodaii aMska---------igLepdsaMnNIyymRaiNsDhqMaI
A Aeropyrum_pernix-RADA QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_OH1 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_OH2 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_OH3 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_TB1 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_TB2 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
A Aeropyrum_pernix-RADA_VAR_TB6 QMarg---------vgLdpdevMKNIywiRaiNshhqIaI
============================================================================
* HUMAN aVaer---------ygLsgsdvLDNVayaRafNtDhqtQL
* S_CEREVISIAE sIaqr---------fgLdpddaLnNVayaRayNaDhqLRL
* Apis_mellifera aVaer---------ykIagdsvLDNVacaRayNtDhqtQL
* Aspergillus_flavus aVaqr---------ygLvgeevLDNVayaRayNsDhqLQL
* Aspergillus_fumigatus aVaqr---------ygLvgeevLDNVayaRayNsDhqLQL
* Bovine aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* C_elegans aIaqr---------ynMdsahvLENIavaRayNsEhlMaL
* Candida_albicans sIaqr---------ygLnpndcLDNVayaRayNaEhqLnL
* Candida_glabrata sIaqr---------fgLdpddaLnNVayaRayNaDhqMRL
* Canis_lupus aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Chaetomium_globosum aVanr---------ygLsgeevLDNVayaRayNsDhqLQL
* Coccidioides_immitis aVaqr---------ygLageevLDNVayaRayNsDhqLQL
* Coprinus_cinereus aVaer---------fgLngeevLDNVayaRayNaDhqqaL
* Cricetulus_griseus aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Cryptococcus_neoformans aVaer---------ygLdgeevLDNIayaRayNaDhqLQL
* Danio_rerio aVaer---------ygLvgsdvLDNVayaRafNtDhqtQL
* Debaryomyces_hansenii sIaqr---------ygLnpedcLDNVayaRayNaEhqfQL
* D_melanogaster aIaqr---------ykLnesevLDNVaftRahNsDQqtKL
* D_pseudoobscura aIaqr---------fkLnesevLDNVscaRayNsDQqtKL
* Emericella_nidulans aVaqr---------ygLvgeevLDNVayaRayNsDhqLQL
* Encephalitozoon_cuniculi pIaer---------fgLdpnevMDNIsyaRayNsDhqsQL
* Eremothecium_gossypii sIaqr---------fgLdpddaLnNVayaRayNaDhqLRL
* Chicken aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Gibberella_zeae gVanr---------fgLsgeevLDNVayaRayNsDhqLQL
* Kluyveromyces_lactis sIaqr---------fgLdpddaLnNVayaRayNaDhqLKL
* Mouse aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Neurospora_crassa aVanr---------ygLsgeevLDNVayaRayNsDhqLQL
* Rabbit aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Pichia_angusta aIarr---------fgLdenetLDNVayaRayNaDhqLQL
* Rat aVaer---------ygLsgsdvLDNVayaRgfNtDhqtQL
* Schizosaccharomyces_pombe aVadr---------ygLngeevLDNVayaRayNaDhqLEL
* Strongylocentrotus_purpuratus aVadr---------ynLsgsdvLDNVayaRahNsDhqsQL
* Tetraodon_nigroviridis aVaerrvsgrslavygLvgsdvLDNVayaRafNtDhqtQL
* Tribolium_castaneum pVaer---------ynMdgqqvLDNVvfaRafNtDhqtEL
* Ustilago_maydis aVaer---------fgLngeevLDNVayaRayNaDhqLQL
* X_tropicalis aVaer---------ygLsgsdvLDNVayaRafNtDhqtQL
* Yarrowia_lipolytica QIarr---------ygLngdevLDNVayaRahNsDhqMQL
* X_laevis-RA51A aVaer---------ygLsgsdvLDNVayaRafNtDhqtQL
* X_laevis-RA51B aVaer---------ygLsgsdvLDNVayaRafNtDhqtQL
Cryptosporidium_hominis QIadr---------fnLnasdcLDNIayaRgfNtEhqMdL
Cryptosporidium_parvum QIadr---------fnLnasdcLDNIayaRgfNtEhqMdL
Dictyostelium_discoideum aIaer---------ynLngehvLDNVsyaRayNsDhqLEL
Entamoeba_histolytica QIaek---------ygLnseeaLnNVavaRahNtEhqMQL
Leishmania_donovani aVaer---------ykLdpedvLaNVacaRafNtDhqqQL
Leishmania_tropica aVaer---------ykLdpedvLaNVacaRafNtDhqqQL
Plasmodium_berghei aIakr---------ygLhptdcLnNIayaKayNcDhqtEL
Plasmodium_falciparum aIakr---------ygLhptdcLnNIayaKayNcDhqtEL
Tetrahymena_thermophila sIaer---------fgLdpqecMENVayaRafNcDQqnKL
Theileria_annulata sIakr---------fgLspsdcLDNVayaRayNtDhqLEL
Theileria_parva sIakr---------fgLspsdcLDNVayaRayNtDhqLEL
Trypanosoma_brucei aVaer---------ysLdpeavLENVacaRayNtDhqqQL
Trypanosoma_cruzi aVaer---------ykLdpqdvLsNVacaRafNtDhqqQL
P Arabidopsis_thaliana QIadr---------fgLngadvLENVayaRayNtDhqsRL
P Oryza_sativa QIadr---------fgLngadvLENVayaRayNtDhqsRL
P Maize-R51A1 QIadr---------fgLngadvLENVayaRayNtDhqsRL
P Maize-R51A2 QIadr---------fgLngadvLENVayaRayNtDhqsRL
============================================================================
B E_COLI KLg---------------v--dIDNLlcsQpdtgEQaLEI
B MYCOBACTERIUM_SMEGMATIS KLg---------------v--dtDsLlvsQpdtgEQaLEI
B MYCOBACTERIUM_TUBERCULOSIS KLg---------------v--dtDsLlvsQpdtgEQaLEI
B Acinetobacter_calcoaceticus KLg---------------v--dIDNLlvsQpdHgEQaLEI
B Actinobacillus_pleuropneumoniae KLg---------------v--dtDaLlisQpdNgEQaLEI
B Actinobacillus_succinogenes KLg---------------v--dVKELfisQpdNgEQaLEI
B Actinomyces_bovis KLg---------------v--dtDaLlvsQpdtgEQaLEI
B Azotobacter_vinelandii KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Bacillus_clausii KLg---------------v--nIDELllsQpdtgEQaLEI
B Bacillus_halodurans KLg---------------v--nIDELllsQpdtgEQaLEI
B Bacillus_licheniformis KLg---------------v--nIDELllsQpdtgEQaLEI
B Bacillus_megaterium KLg---------------v--nIDELllsQpdtgEQaLEI
B Bacillus_subtilis KLg---------------v--nIEELllsQpdtgEQaLEI
B Bordetella_pertussis KLg---------------v--nLtDLlisQpdtgEQaLEI
B Burkholderia_fungorum KLg---------------v--nVnDLlvsQpdtgEQaLEI
B Chromobacterium_violaceum KLg---------------v--nVEDLlisQpdtgEQaLEI
B Clostridium_acetobutylicum aLg---------------v--dIDNLvvsQpdtgEQaLEI
B Clostridium_thermocellum nLg---------------v--dIENLivsQpdtgEQaLEI
B Colwellia_psychrerythraea KLg---------------v--nIDELlisQpdtgEQaLEI
B Corynebacterium_efficiens KLg---------------v--dtDaLlvsQpdtgEQaLEI
B Desulfotalea_psychrophila KLg---------------v--nIDNLlvsQpdfgEQaLEI
B Enterococcus_faecalis KLg---------------v--nIDELllsQpdtgEQgLEI
B Haemophilus_ducreyi KLg---------------v--dIDaLlisQpdNgEQaLEI
B Haemophilus_influenzae KLg---------------v--dVKELfvsQpdNgEQaLEI
B Histophilus_somni KLg---------------v--dVKELlisQpdNgEQaLEI
B Kineococcus_radiotolerans KLg---------------v--dtDaLlvsQpdtgEQaLEI
B Leifsonia_xyli KLg---------------v--dIDaLlvsQpdtgEQaLEI
B Mannheimia_succiniciproducens KLg---------------v--dVKELlvsQpdNgEQaLEI
B Nitrosomonas_europaea KIg---------------v--nVQELlisQpdNgEQaLEI
B Nitrosomonas_eutropha KIg---------------v--nVQELlisQpdNgEQaLEI
B Oceanobacillus_iheyensis aLg---------------v--nIDELllsQpdtgEQaLEI
B Pasteurella_multocida KLg---------------v--nVnELlvsQpdNgEQaLEI
B Photobacterium_profundum KLg---------------v--dIDqLlvsQpdtgEQaLEI
B Photorhabdus_luminescens KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Proteus_mirabilis KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Pseudomonas_cepacia KLg---------------v--nVpELlisQpdtgEQaLEI
B Pseudomonas_pseudomallei KLg---------------v--nVpELlisQpdtgEQaLEI
B Shewanella_amazonensis KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Shewanella_putrefaciens KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Streptomyces_avermitilis KLg---------------v--dIDNLilsQpdNgEQaLEI
B Vibrio_alginolyticus KLg---------------v--dIDaLlvsQpdtgEQaLEI
B Vibrio_angustum KLg---------------v--dIDqLlvsQpdtgEQaLEI
B Vibrio_cholerae KLg---------------v--nIDELlvsQpdtgEQaLEI
B Vibrio_fischeri KLg---------------v--nIDELlvsQpdtgEQaLEI
B Vibrio_parahaemolyticus KLg---------------v--dIDaLlvsQpdtgEQaLEI
B Vibrio_splendidus KLg---------------v--dIDaLlvsQpdtgEQaLEI
B Vibrio_vulnificus KLg---------------v--nIDqLlvsQpdtgEQaLEI
B Yersinia_enterocolitica KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Cupriavidus_metallidurans-Q1LR74 KLg---------------v--dVgNLlisQpdtgEQaLEI
B Cupriavidus_metallidurans-RECA KLg---------------v--dVgNLlisQpdtgEQaLEI
B Erwinia_carotovora-RECA KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Erwinia_carotovora-RECA_ERWCT KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Listeria_monocytogenes-RECA nLg---------------v--nIDELllsQpdtgEQaLEI
B Listeria_monocytogenes-RECA_LISMF nLg---------------v--nIDELllsQpdtgEQaLEI
B Neisseria_gonorrhoeae-RECA KLg---------------v--kVEELylsQpdtgEQaLEI
B Neisseria_gonorrhoeae-RECA_VAR KLg---------------v--kVEELylsQpdtgEQaLEI
B Salmonella_typhi-RECA KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Salmonella_typhi-RECA_SALPA KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Streptomyces_coelicolor-RECA KLg---------------v--dIDNLilsQpdNgEQaLEI
B Streptomyces_coelicolor-RECA_STRL KLg---------------v--dIDNLilsQpdNgEQaLEI
B Xylella_fastidiosa-RECA KLg---------------v--nVDDLllsQpdtgEQaLEI
B Xylella_fastidiosa-RECA_XYLFT KLg---------------v--nVDDLllsQpdtgEQaLEI
B Yersinia_pestis-RECA KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Yersinia_pestis-RECA_YERPS KLg---------------v--dIDNLlcsQpdtgEQaLEI
B Mycobacterium_tuberculosis-RECA KLg---------------v--dtDsLlvsQpdtgEQaLEI
B Mycobacterium_tuberculosis-RECA_M KLg---------------v--dtDsLlvsQpdtgEQaLEI
B Neisseria_meningitidis-RECA KLg---------------v--kVEELylsQpdtgEQaLEI
B Neisseria_meningitidis-RECA_NEIMA KLg---------------v--kVEELylsQpdtgEQaLEI
B Neisseria_meningitidis-RECA_VAR KLg---------------v--kVEELylsQpdtgEQaLEI
B Xanthomonas_vasicola-RECA_XANAC KLg---------------v--nVDDLllsQpdtgEQaLEI
B Xanthomonas_vasicola-RECA_XANCP KLg---------------v--nVDDLllsQpdtgEQaLEI
B Xanthomonas_vasicola-YP_201580 KLg---------------v--nVDDLllsQpdtgEQaLEI
B Pseudomonas_aeruginosa-Q48F94 KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA_PSEF5 KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA_PSEFL KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA_PSEPK KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA_PSEPU KLg---------------v--nVDDLlvsQpdtgEQaLEI
B Pseudomonas_aeruginosa-RECA_PSESM KLg---------------v--nVDDLlvsQpdtgEQaLEI
============================================================================
B DEINOCOCCUS_RADIODURANS aLg---------------v--ntDELlvsQpdNgEQaLEI
B Deinococcus_geothermalis sLg---------------v--ntDELlvsQpdNgEQaLEI
B Thermus_aquaticus-RECA KLg---------------v--dVQELlvsQpdtgEQaLEI
B Thermus_aquaticus-RECA_THET2 RLg---------------v--qVEDLlvsQpdtgEQaLEI
B Thermus_aquaticus-RECA_THET8 RLg---------------v--qVEDLlvsQpdtgEQaLEI
B Thermus_aquaticus-RECA_THETH RLg---------------v--qVEDLlvsQpdtgEQaLEI
============================================================================
Consensus qMxxxxxxxxxxxxxxlxxxxxMedIxxxRxxnxDqxlqI
410 420 430 440
----:----|----:----|----:----|----:----|
Consensus vexlxqxxxxxxxxxxxxixLVVVDSvxalfrxefigrdx
============================================================================
A PYROCOCCUS_FURIOSUS VQqaedkik-ellntdrpVkLLIVDSLtshFRsEYIGRga
A Archaeoglobus_fulgidus VDnakElae-klkkegrpVrLIIVDSLmshFRaEYVGRgt
A Pyrococcus_abyssi VQqaedkik-ellntdkpVkLLIVDSLtshFRsEYIGRga
============================================================================
A METHANOCOCCUS_VOLTAE aEkIedliqegn-----nIkLVVIDSLtstFRnEYtGRgk
A Methanococcus_jannaschii aEnVenliregh-----nIkLVIVDSLtstFRtEYIGRgk
A Methanococcus_maripaludis aEkIedlikggn-----nIkLVIIDSLtstFRnEFtGRgk
============================================================================
A SULFOLOBUS_SOLFATARICUS VDdLqElvs-kdp----sIkLIVVDSVtshFRaEYpGREn
A Desulfurococcus_amylolyticus VDeLftfvp-kn-----dVrLVILDSVtshFRaEYpGREh
A Sulfolobus_acidocaldarius VDdLqElit-kdp----aIkLIIVDSItshFRaEYpGREn
A Sulfolobus_tokodaii VDdLqElis-kdp----aIkLVIVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH1 VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH2 VDkLftmvk-nd-----nIrLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH3 VDkLftmvk-nd-----nIkLVVVDSVtshFRvEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB1 VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB2 VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB6 VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
============================================================================
* HUMAN Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* S_CEREVISIAE LDaaaQmms-es-----rfsLIVVDSVmALYRtDFsGR--
* Apis_mellifera Liqasammt-es-----ryaLLIVDSatgLYRtEYsGR--
* Aspergillus_flavus LnqasQmmc-et-----rfsLLVVDSatALYRtDFnGR--
* Aspergillus_fumigatus LnqasQmmc-et-----rfsLLVVDSatsLYRtDFnGR--
* Bovine Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* C_elegans Iiragamms-es-----ryaVVIVDcatAhFRnEYtGR--
* Candida_albicans LniaaEmma-es-----rfsLLIVDSImsLYRtDYaGR--
* Candida_glabrata LDaaaQmms-es-----rfsLIVVDSVmALYRtDFsGR--
* Canis_lupus Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Chaetomium_globosum Lnqaaammc-et-----rfsLLVVDSatsLYRtDFLGR--
* Coccidioides_immitis LnqasQmmc-et-----rfsLLVVDSatsLYRtDFsGR--
* Coprinus_cinereus Ltsasalms-es-----rfcLLIVDSctALYRtDFsGR--
* Cricetulus_griseus Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Cryptococcus_neoformans Lvqasamma-es-----rfsLLIVDSctsLYRtDFsGR--
* Danio_rerio Lyqasammt-es-----ryaLLIVDSatALYRtDYsGR--
* Debaryomyces_hansenii LnhaaQmms-es-----rfscLIVDSImsLYRtDYsGR--
* D_melanogaster IQmaagmlf-es-----ryaLLIVDSamALYRsDYIGR--
* D_pseudoobscura LQmaagmlf-et-----ryaaVIVDSVmALYRsDYIGR--
* Emericella_nidulans LnqasQmmc-et-----rfsLLVVDSatsLYRtDFnGR--
* Encephalitozoon_cuniculi Likasamms-es-----kysVLIIDSatALYRtDFsGR--
* Eremothecium_gossypii LDaaaQmms-es-----rfsLIVVDSImALYRtDFsGR--
* Chicken Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Gibberella_zeae Lnqaaammc-et-----rfsLLIVDSatsLYRtDFcGR--
* Kluyveromyces_lactis LDaaaQmms-es-----rfsLIIVDSImALYRtDFsGR--
* Mouse Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Neurospora_crassa Lnqaaammc-et-----rfsLLIVDSatsLYRtDFLGR--
* Rabbit Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Pichia_angusta Lhqaasmmt-es-----rfsLLIVDSImALYRtDYsGR--
* Rat Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Schizosaccharomyces_pombe LQqaanmms-es-----rfsLLVVDSctALYRtDFsGR--
* Strongylocentrotus_purpuratus Llqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Tetraodon_nigroviridis Lyqasamma-es-----ryaLLIVDSatALYRtDYsGRvw
* Tribolium_castaneum Lvhaaammm-es-----rycLLIVDSatsLYRtDYsGR--
* Ustilago_maydis Lmqasamma-es-----rfsLLIVDSLtsLYRtDFsGR--
* X_tropicalis Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Yarrowia_lipolytica LQmaanmmt-ks-----rfscLIVDSImALYRtDYaGR--
* X_laevis-RA51A Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* X_laevis-RA51B Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
Cryptosporidium_hominis LQsavammt-es-----rfaLMIVDSatALYRsEYnGR--
Cryptosporidium_parvum LQsavammt-es-----rfaLMIVDSatALYRsEYnGR--
Dictyostelium_discoideum Lvqasamms-es-----ryaLLIVDSatALYRtDYaGR--
Entamoeba_histolytica LQmasglma-ke-----rygLLIIDSatALYRtDYsGR--
Leishmania_donovani Llqasamma-en-----rfaLIIVDSatALYRtDYsGR--
Leishmania_tropica Llqasamma-en-----rfaLIIVDSatALYRtDYsGR--
Plasmodium_berghei Lidasamma-dt-----rfaLLIVDSatALYRsEYtGR--
Plasmodium_falciparum Lidasamma-da-----rfaLLIVDSatALYRsEYIGR--
Tetrahymena_thermophila Lvqaaalma-es-----kyaLLIVDSatALYRtDYsGR--
Theileria_annulata Lveasamma-qt-----rfaLLIVDSatsLYRsDYsGR--
Theileria_parva Lveasamma-qt-----rfaLLIVDSatsLYRsDYsGR--
Trypanosoma_brucei Llqasatma-eh-----rVaIIVVDSatALYRtDYnGR--
Trypanosoma_cruzi Llqasamma-en-----rfaIIIVDSatALYRtDYsGR--
P Arabidopsis_thaliana Lleaasmmi-et-----rfaLLIVDSatALYRtDFsGR--
P Oryza_sativa Lleaasmmi-et-----rfaLMIVDSatALYRtDFsGR--
P Maize-R51A1 Lleaasmmi-et-----rfaLMVVDSatALYRtDFsGR--
P Maize-R51A2 Lleaasmmv-et-----rfaLMVVDSatALYRtDFsGR--
============================================================================
B E_COLI cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B MYCOBACTERIUM_SMEGMATIS aDmLvR-sg--a------LdIIVIDSVaALvpraeIegEm
B MYCOBACTERIUM_TUBERCULOSIS aDmLiR-sg--a------LdIVLIDSVaALvpraeLegEm
B Acinetobacter_calcoaceticus aDmLvR-sg--a------IdLIVVDSVaALtpkaeIegEm
B Actinobacillus_pleuropneumoniae cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Actinobacillus_succinogenes cDaLvR-sg--a------IdVIIVDSVaALtpkaeIegDm
B Actinomyces_bovis aDmLvR-sg--a------IdIIVIDSVaALvpraeIegEm
B Azotobacter_vinelandii tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Bacillus_clausii aEaLvR-sg--a------LdIIVIDSVaALvpkaeIegEm
B Bacillus_halodurans aEaLvR-sg--a------IdVIVIDSVaALvpkaeIegEm
B Bacillus_licheniformis aEaLvR-sg--a------VdIVVIDSVaALvpkaeIegDm
B Bacillus_megaterium aEaLvR-sg--a------VdIIVVDSVaALvpkaeIegEm
B Bacillus_subtilis aEaLvR-sg--a------VdIVVVDSVaALvpkaeIegDm
B Bordetella_pertussis tDaLvR-sg--s------VdLIVIDSVaALvpkaeIegEm
B Burkholderia_fungorum aDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Chromobacterium_violaceum cDmLvR-ss--g------VdVIVVDSVaALvpkaeIegEm
B Clostridium_acetobutylicum aEaLvR-sg--a------IdVIVVDSVaALvpkaeIegEm
B Clostridium_thermocellum aEaLvR-sg--a------IdVIVIDSVaALvpkaeIdgEm
B Colwellia_psychrerythraea VDmLtR-sg--a------IdVIVVDSVaALtpkaeIegDm
B Corynebacterium_efficiens aDmLvR-sg--a------IdILVIDSVaALtpkaeIegEm
B Desulfotalea_psychrophila aEiLiR-sg--g------VdIIVVDSVaALtpkaeIdgNv
B Enterococcus_faecalis aDaLvs-sg--a------IdIVVIDSVaALvpraeIdgEm
B Haemophilus_ducreyi cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Haemophilus_influenzae cDaLvR-sg--a------IdVIIVDSVaALtpkaeIegDm
B Histophilus_somni cDaLvR-sg--a------VdVVIVDSVaALtpkaeIegEm
B Kineococcus_radiotolerans aDmLiR-sg--a------LdIIVIDSVaALvpkaeIegEm
B Leifsonia_xyli aDmLvR-sg--s------IdLIVIDSVaALvpraeIegEm
B Mannheimia_succiniciproducens cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Nitrosomonas_europaea tDmLvR-sg--s------VdVVVVDSVaALtpraeIegEm
B Nitrosomonas_eutropha tDmLvR-sg--s------VdIVVIDSVaALtpraeIegEm
B Oceanobacillus_iheyensis aEaLvR-sg--a------VdIIVVDSVaALvpkaeIegEm
B Pasteurella_multocida cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegEm
B Photobacterium_profundum cDaLaR-sg--a------VdLIVIDSVaALtpkaeIegEm
B Photorhabdus_luminescens cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Proteus_mirabilis cDaLsR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Pseudomonas_cepacia tDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Pseudomonas_pseudomallei VDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Shewanella_amazonensis cDaLtR-sg--a------VdVIIVDSVaALvpkaeIegEi
B Shewanella_putrefaciens cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Streptomyces_avermitilis VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Vibrio_alginolyticus cDaLaR-sg--a------IdVMVVDSVaALtpkaeIegEm
B Vibrio_angustum cDaLaR-sg--a------VdLIVVDSVaALtpkaeIegEm
B Vibrio_cholerae cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEm
B Vibrio_fischeri cDaLaR-sg--a------VdVMVIDSVaALtpkaeIegEm
B Vibrio_parahaemolyticus cDaLaR-sg--a------IdVMVVDSVaALtpkaeIegEm
B Vibrio_splendidus cDaLaR-sg--a------IdVLVIDSVaALtpkaeIegEm
B Vibrio_vulnificus cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEm
B Yersinia_enterocolitica cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Cupriavidus_metallidurans-Q1LR74 tDaLvR-sg--s------IdLIVIDSVaALvpkaeIegEm
B Cupriavidus_metallidurans-RECA tDaLvR-sg--s------IdLIVIDSVaALvpkaeIegEm
B Erwinia_carotovora-RECA cDaLsR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Erwinia_carotovora-RECA_ERWCT cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Listeria_monocytogenes-RECA aEaLvR-sg--a------VdMLVIDSVaALvpraeIegEm
B Listeria_monocytogenes-RECA_LISMF aEaLvR-sg--a------VdMLVIDSVaALvpraeIegEm
B Neisseria_gonorrhoeae-RECA cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_gonorrhoeae-RECA_VAR cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Salmonella_typhi-RECA cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Salmonella_typhi-RECA_SALPA cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Streptomyces_coelicolor-RECA VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Streptomyces_coelicolor-RECA_STRL VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Xylella_fastidiosa-RECA aDmLvR-sg--s------IdIMVIDSVaALtpraeIegEm
B Xylella_fastidiosa-RECA_XYLFT aDmLvR-sg--s------IdIMVIDSVaALtpraeIegEm
B Yersinia_pestis-RECA cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Yersinia_pestis-RECA_YERPS cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Mycobacterium_tuberculosis-RECA aDmLiR-sg--a------LdIVVIDSVaALvpraeLegEm
B Mycobacterium_tuberculosis-RECA_M aDmLiR-sg--a------LdILVIDSVaALvpraeLegEm
B Neisseria_meningitidis-RECA cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_meningitidis-RECA_NEIMA cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_meningitidis-RECA_VAR cDtLvR-sg--g------VdMVVVDSVaALvpkaeIegDm
B Xanthomonas_vasicola-RECA_XANAC aDmLvR-sg--s------VdIVVVDSVaALtpkaeIegEm
B Xanthomonas_vasicola-RECA_XANCP aDmLvR-ss--s------VdIVVIDSVaALtpkaeIegEm
B Xanthomonas_vasicola-YP_201580 aDmLvR-ss--s------VdIVVIDSVaALtpkaeIegEm
B Pseudomonas_aeruginosa-Q48F94 tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEF5 tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEFL tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEPK tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEPU tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSESM tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
============================================================================
B DEINOCOCCUS_RADIODURANS MElLvR-sg--a------IdVVVVDSVaALtpraeIegDm
B Deinococcus_geothermalis MElLvR-sg--a------IdVVVVDSVaALtpraeIegEm
B Thermus_aquaticus-RECA VElLaR-sg--a------VdVIVVDSVaALvpkaeIegEm
B Thermus_aquaticus-RECA_THET2 VElLaR-sg--a------VdVIVVDSVaALvpraeIegEm
B Thermus_aquaticus-RECA_THET8 VElLaR-sg--a------VdVIVVDSVaALvpraeIegEm
B Thermus_aquaticus-RECA_THETH VElLaR-sg--a------VdVIVVDSVaALvpgaeIegEm
============================================================================
Consensus vexlxqxxxxxxxxxxxxixLVVVDSvxalfrxefigrdx
450 460 470 480
----:----|----:----|----:----|----:----|
Consensus gexnxxmRqqxxxLsQxLRqLxxlxeqxxxxvIxxNqixx
============================================================================
A PYROCOCCUS_FURIOSUS la----eRQQ--kLaKhLadLhrLanlydiaVfvtNQVqa
A Archaeoglobus_fulgidus la----dRQQ--kLNRhLhdLmkfgElynaaIVvtNQVma
A Pyrococcus_abyssi la----eRQQ--kLaKhLadLhrLanlyeiaVfvtNQVqa
============================================================================
A METHANOCOCCUS_VOLTAE la----eRQQ--kLgRhMatLnkLaDlfncvVLvtNQVsa
A Methanococcus_jannaschii la----eRQQ--kLgRhMatLnkLaDiyncvVIvtNQVaa
A Methanococcus_maripaludis la----eRQQ--kLgRhMatLnkLaDlynciVLvtNQVaa
============================================================================
A SULFOLOBUS_SOLFATARICUS la----VRQQ--kLNKhLhQLtrLaEvydiaVIitNQVma
A Desulfurococcus_amylolyticus la----eRQQ--kLNshLhQLmrLaEaynvaVVvtNQVma
A Sulfolobus_acidocaldarius la----VRQQ--kLNKhLhQLvrLaEmydiaVIitNQVma
A Sulfolobus_tokodaii la----VRQQ--kLNKhLhQLvrLaEmydlaVIitNQVma
A Aeropyrum_pernix-RADA la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_OH1 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_OH2 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_OH3 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_TB1 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_TB2 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
A Aeropyrum_pernix-RADA_VAR_TB6 la----MRQQ--lLNRhLhQLmrLaDifnvaVVitNQVma
============================================================================
* HUMAN GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* S_CEREVISIAE GElS--aRQm--hLaKfMRaLqrLaDQfgvaVVvtNQVva
* Apis_mellifera GEla--aRQm--hLgRfLRmLlrLaDEhgvaVVitNQVva
* Aspergillus_flavus GElS--tRQt--hLaKfMRtLqrLaDEfgiaVVitNQVva
* Aspergillus_fumigatus GElS--sRQt--hLaKfMRtLqrLaDEfgiaVVitNQVva
* Bovine GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* C_elegans GDla--eRQm--kLSafLKcLakLaDEygvaVIitNQVva
* Candida_albicans GElS--aRQt--hVaKfMRtLqrLaDEfgiaVVitNQVva
* Candida_glabrata GElS--aRQm--hLaKfMRaLqrLaDQfgvaVVvtNQVva
* Canis_lupus GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Chaetomium_globosum GElN--sRQt--hLaKfLRtLqrLaDEfgiaVVitNQVva
* Coccidioides_immitis GElS--sRQt--hLaRfMRtLqrLaDEfgvaVVitNQVva
* Coprinus_cinereus GElS--sRQt--hLgKfLRtLqrLaDEfgiaVVvtNQVms
* Cricetulus_griseus GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Cryptococcus_neoformans GElS--aRQm--hLaKfLRtLmrLaDEfgvaVVvtNQVva
* Danio_rerio GElS--aRQg--hLgRfLRmLlrLaDEfgvaVVitNQVva
* Debaryomyces_hansenii aElS--aRQt--hVaKyMRtLqrLaDEfgiaVVitNQVva
* D_melanogaster GEla--aRQn--hLglfLRmLqrLaDEfgvaVVitNQVta
* D_pseudoobscura GEla--aRQn--hLglcMRQLqrLaDEfgvaVVitNQVta
* Emericella_nidulans GElS--tRQt--hLaKfMRtLqrLaDEfgiaVVitNQVva
* Encephalitozoon_cuniculi GElg--aRQl--hLaKyLRsLvnLaEtfriaVIitNQVvs
* Eremothecium_gossypii GElS--aRQm--hLaKfMRaLqrLaDQfgvaVVvtNQVva
* Chicken GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Gibberella_zeae GElS--nRQt--hLaKfMRtLqrLaDEfgiaVVitNQVva
* Kluyveromyces_lactis GElS--aRQm--hLaKfMRsLqrLaDQfgvaaVvtNQVva
* Mouse GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Neurospora_crassa GElS--sRQt--hLaKfMRtLqrLaDEfgiaVVitNQVva
* Rabbit GElS--aRQm--hLaRfLRmLlrLaDEfgvtVVitNQVva
* Pichia_angusta GElS--aRQm--hVaKfMRtLqrLaDEfgiaVVitNQVva
* Rat GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Schizosaccharomyces_pombe GElS--aRQm--hLaRfMRtLqrLaDEfgiaVVitNQVva
* Strongylocentrotus_purpuratus GEla--sRQm--hLgRfLRtLlrLaDEygvaVVitNQVva
* Tetraodon_nigroviridis rrcg--dnQsgggtgRrgRhVfrrsQEthwrqhsgSRfyh
* Tribolium_castaneum GElS--aRQn--hLaRfLRmLlrLaDEfgvaVVltNQVva
* Ustilago_maydis GElS--aRQm--hLaKfLRgLmrLaDEfgvaVVitNQVva
* X_tropicalis GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* Yarrowia_lipolytica GElS--aRQt--hVaKfMRtLqrLaDEfgiaVVitNQVva
* X_laevis-RA51A GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
* X_laevis-RA51B GElS--aRQm--hLaRfLRmLlrLaDEfgvaVVitNQVva
Cryptosporidium_hominis GEla--tRQs--hLgQfLRaLqkIaDtfgvaVVitNQVms
Cryptosporidium_parvum GEla--tRQs--hLgQfLRaLqkIaDtfgvaVVitNQVms
Dictyostelium_discoideum GEla--dRQK--hLaRfLRtLqrLaDEfgvaVVitNQVva
Entamoeba_histolytica GEla--sRQm--hLaKfLRaLqrIaDEfsvaVVltNQVva
Leishmania_donovani nEla--aRQm--hLgKfLRsLhnLaEEygvaVVvtNQVva
Leishmania_tropica nEla--aRQm--hLgKfLRsLhnLaEEygvaVVvtNQVva
Plasmodium_berghei GEla--nRQs--hLcRfLRgLqrIaDiygvaVIitNQVva
Plasmodium_falciparum GEla--nRQs--hLcRfLRgLqrIaDiygvaVIitNQVva
Tetrahymena_thermophila GElS--VRQn--hLgKfLRnLqrLaDEfgiaVVitNQVms
Theileria_annulata GEla--sRQm--hLcKfLRaLqrIaDtfgvaVVitNQVva
Theileria_parva GEla--sRQm--hLcKfLRaLqrIaDtfgvaVVitNQVva
Trypanosoma_brucei GEla--aRQm--hLgKfLRsLrnLanEynvaVVvtNQVva
Trypanosoma_cruzi nEla--aRQm--hLgKfLRsLhnLaEEygvaVVvtNQVva
P Arabidopsis_thaliana GElS--aRQm--hLaKfLRsLqkLaDEfgvaVVitNQVva
P Oryza_sativa GElS--aRQm--hMaKfLRsLqkLaDEfgvaVVitNQVva
P Maize-R51A1 GElS--aRQm--hMaKfLRsLqkLaDEfgvaVVitNQVva
P Maize-R51A2 GElS--aRQm--hLaKfLRsLqkLaDEfgvaVVitNQVva
============================================================================
B E_COLI GDsHmgLaaR--mMSQaMRKLagnlKQsntlLIfiNQIrm
B MYCOBACTERIUM_SMEGMATIS GDsHvgLQaR--lMSQaLRKMtgalnnsgttaIfiNQLre
B MYCOBACTERIUM_TUBERCULOSIS GDsHvgLQaR--lMSQaLRKMtgalnnsgttaIfiNQLre
B Acinetobacter_calcoaceticus GDsHmgLQaR--lMSQaLRKItgnaKRsncmVIfiNQIrm
B Actinobacillus_pleuropneumoniae GDsHmgLQaR--lMSQaLRKLtaniKatnclVVfiNQIrm
B Actinobacillus_succinogenes GDaHvgLQaR--lMSQaLRKLtaqiKssnclVVfiNQIrm
B Actinomyces_bovis GDsHvgLQaR--lMSQaLRKMtsalnnsgttaIfiNQLre
B Azotobacter_vinelandii GDqHvgLQaR--lMSQaLRKItgniQnanclVIfiNQIrm
B Bacillus_clausii GDsHvgLQaR--lMSQaLRKLsgainKsktiaIfiNQIre
B Bacillus_halodurans GDsHvgLQaR--lMSQaLRKLsgainKsktiaIfiNQIre
B Bacillus_licheniformis GDsHvgLQaR--lMSQaLRKLsgainKsktiaIfiNQIre
B Bacillus_megaterium GDsHvgLQaR--lMSQaLRKLsgainKsktiaIfiNQIre
B Bacillus_subtilis GDsHvgLQaR--lMSQaLRKLsgainKsktiaIfiNQIre
B Bordetella_pertussis GDslpgLQaR--lMSQaLRKLtatiKRtncmVIfiNQIrm
B Burkholderia_fungorum GDslpgLQaR--lMSQaLRKLtgtiKRtnclVIfiNQIrm
B Chromobacterium_violaceum GDsHvgLQaR--lMSQaLRKLtgniKRtntlVIfiNQIrm
B Clostridium_acetobutylicum GDsHvgLQaR--lMSQaLRKLtgsinKskciaIfiNQLre
B Clostridium_thermocellum GDsHvgLQaR--lMSQaLRKLagVinKsrttaIfiNQLre
B Colwellia_psychrerythraea GDsHmgLQaR--mLSQaMRKLtgnlKKsntmLIfiNQIrm
B Corynebacterium_efficiens GDsHvgLQaR--lMSQaLRKMtgalynsgttaIfiNQLre
B Desulfotalea_psychrophila GDvHvgLQaR--lMSQaMRKfagVlnRsntvLIfiNQIrm
B Enterococcus_faecalis GasHvgLQaR--lMSQaLRKLsgsinKtktiaIfiNQIre
B Haemophilus_ducreyi GDsymgLQaR--lMSQaLRKLtaniKatnclVVfiNQIrm
B Haemophilus_influenzae GDsHmgLQaR--lMSQaLRKLtgqiKnanclVVfiNQIrm
B Histophilus_somni GDtHvgLQaR--lMSQaLRKLtgqiKnsnclVVfiNQIrm
B Kineococcus_radiotolerans GDsHvgLQaR--lMSQaLRKItgalnhsgttaIfiNQLre
B Leifsonia_xyli GDaHvgLQaR--lMSQaLRKLtgalsQtnttMIfiNQLre
B Mannheimia_succiniciproducens GDsHvgLQaR--lMSQaLRKLtgqiKnanclVVfiNQIrm
B Nitrosomonas_europaea GEpqmgLQaR--lMSQaLRKLtaniKRtntmVIfiNQIrm
B Nitrosomonas_eutropha GEpqmgLQaR--lMSQaLRKLtaniKRtnttVIfiNQIrm
B Oceanobacillus_iheyensis GDsHvgLQaR--lMSQaLRKLsgainKskttaIfiNQIre
B Pasteurella_multocida GDsHmgLQaR--lMSQaLRKLtgqiKnsnclVVfiNQIrm
B Photobacterium_profundum GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Photorhabdus_luminescens GDsHmgLaaR--mMSQaMRKLagnlKssntlLIfiNQIrm
B Proteus_mirabilis GDsHvgLaaR--mMSQaMRKLagnlKnsntlLIfiNQIrm
B Pseudomonas_cepacia GDslpgLQaR--lMSQaLRKLtgtiKRtnclVIfiNQIrm
B Pseudomonas_pseudomallei GDalpgLQaR--lMSQaLRKLtgtiKRtnclVIfiNQIrm
B Shewanella_amazonensis GDsHvgLaaR--mMSQaMRKLagnlKQsntlLIfiNQIrm
B Shewanella_putrefaciens GDsHmgLaaR--mMSQaMRKLagnlKQsntlLIfiNQIrm
B Streptomyces_avermitilis GDsHvgLQaR--lMSQaLRKItsalnQskttaIfiNQLre
B Vibrio_alginolyticus GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Vibrio_angustum GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Vibrio_cholerae GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Vibrio_fischeri GDsHmgLQaR--mLSQaMRKLtgnlKQsncmaIfiNQIrm
B Vibrio_parahaemolyticus GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Vibrio_splendidus GDsHmgLQaR--mLSQaMRKLtgnlKQsncmaIfiNQIrm
B Vibrio_vulnificus GDsHmgLQaR--mLSQaMRKLtgnlKQsncmcIfiNQIrm
B Yersinia_enterocolitica GDsHmgLaaR--mMSQaMRKLagnlKnantlLIfiNQIrm
B Cupriavidus_metallidurans-Q1LR74 GDslpgLQaR--lMSQaLRKLtgtiKRtnclVIfiNQIrm
B Cupriavidus_metallidurans-RECA GDslpgLQaR--lMSQgLRKLtgtiKRtnclVIfiNQIrm
B Erwinia_carotovora-RECA GDsHvgLaaR--mMSQaMRKLagnlKnsntlLIfiNQIrm
B Erwinia_carotovora-RECA_ERWCT GDsHmgLaaR--mMSQaMRKLagnlKQantlLIfiNQIrm
B Listeria_monocytogenes-RECA GDaHvgLQaR--lMSQaLRKLsgVinKsktiaIfiNQIre
B Listeria_monocytogenes-RECA_LISMF GDaHvgLQaR--lMSQaLRKLsgVinKsktiaIfiNQIre
B Neisseria_gonorrhoeae-RECA GDsHvgLQaR--lMSQaLRKLtghiKKtntlVVfiNQIrm
B Neisseria_gonorrhoeae-RECA_VAR GDsHvgLQaR--lMSQaLRKLtghiKKtntlVVfiNQIrm
B Salmonella_typhi-RECA GDsHmgLaaR--mMSQaMRKLagnlKQsntlLIfiNQIrm
B Salmonella_typhi-RECA_SALPA GDsHmgLaaR--mMSQaMRKLagnlKQsntlLIfiNQIrm
B Streptomyces_coelicolor-RECA GDsHvgLQaR--lMSQaLRKItsalnQskttaIfiNQLre
B Streptomyces_coelicolor-RECA_STRL GDsHvgLQaR--lMSQaLRKItsalnQskttaIfiNQLre
B Xylella_fastidiosa-RECA GDqlpgLQaR--lMSQaLRKLtgniKRsntlVIfiNQLrm
B Xylella_fastidiosa-RECA_XYLFT GDqlpgLQaR--lMSQaLRKLtgniKRsntlVIfiNQLrm
B Yersinia_pestis-RECA GDsHmgLaaR--mMSQaMRKLagnlKnantlLIfiNQIrm
B Yersinia_pestis-RECA_YERPS GDsHmgLaaR--mMSQaMRKLagnlKnantlLIfiNQIrm
B Mycobacterium_tuberculosis-RECA GDsHvgLQaR--lMSQaLRKMtgalnnsgttaIfiNQLrd
B Mycobacterium_tuberculosis-RECA_M GDsHvgLQaR--lMSQaLRKMtgalnnsgttaIfiNQLre
B Neisseria_meningitidis-RECA GDsHvgLQaR--lMSQaLRKLtghiKKtntlVVfiNQIrm
B Neisseria_meningitidis-RECA_NEIMA GDsHvgLQaR--lMSQaLRKLtghiKKtntlVVfiNQIrm
B Neisseria_meningitidis-RECA_VAR GDsHvgLQaR--lMSQaLRKLtghiKKtntlVVfiNQIrm
B Xanthomonas_vasicola-RECA_XANAC GDqlpgLQaR--lMSQaLRKLtgniKRsntlVVfiNQLrm
B Xanthomonas_vasicola-RECA_XANCP GDqlpgLQaR--lMSQaLRKLtgniKRsntlVVfiNQLrm
B Xanthomonas_vasicola-YP_201580 GDqlpgLQaR--lMSQaLRKLtgniKRsntlVVfiNQLrm
B Pseudomonas_aeruginosa-Q48F94 GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA GDaHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA_PSEF5 GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA_PSEFL GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA_PSEPK GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA_PSEPU GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
B Pseudomonas_aeruginosa-RECA_PSESM GDmHvgLQaR--lMSQaLRKItgniKnanclVIfiNQIrm
============================================================================
B DEINOCOCCUS_RADIODURANS GDslpgLQaR--lMSQaLRKLtaIlsKtgtaaIfiNQVre
B Deinococcus_geothermalis GDslpgLQaR--lMSQaLRKLtaIlsKtgtaaIfiNQVre
B Thermus_aquaticus-RECA GDqHvgLQaR--lMSQaLRKLtaVlsKsntaaIfiNQVre
B Thermus_aquaticus-RECA_THET2 GDqHvgLQaR--lMSQaLRKLtaVlaKsntaaIfiNQVre
B Thermus_aquaticus-RECA_THET8 GDqHvgLQaR--lMSQaLRKLtaVlaKsntaaIfiNQVre
B Thermus_aquaticus-RECA_THETH GDqHvgLQaR--lMSQaLRKLtaVlaKsntaaIfiNQVre
============================================================================
Consensus gexnxxmRqqxxxLsQxLRqLxxlxeqxxxxvIxxNqixx
490 500 510 520
----:----|----:----|----:----|----:----|
Consensus kixvxfgxxsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS RpdafFGdpTrpigghilahsa------------------
A Archaeoglobus_fulgidus RpdVlFGdpTkpvgghivahta------------------
A Pyrococcus_abyssi RpdafFGdpTrpigghilahsa------------------
============================================================================
A METHANOCOCCUS_VOLTAE KpdafFGmaeqaigghivghaa------------------
A Methanococcus_jannaschii RpdalFGpseqaigghivghaa------------------
A Methanococcus_maripaludis KpdayFGvaeqaigghvvghaa------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS RpdMfYGdpTvavgghtlyhvp------------------
A Desulfurococcus_amylolyticus RpdVfYGdpTtavgghvlahtp------------------
A Sulfolobus_acidocaldarius RpdMfYGdpTtavgghtlyhvp------------------
A Sulfolobus_tokodaii RpdMfYGdpTvavgghtlyhvp------------------
A Aeropyrum_pernix-RADA RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH1 RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH2 RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH3 RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB1 RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB2 RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB6 RpdVfYGdpTqavgghvlghap------------------
============================================================================
* HUMAN QVd-g--a-a--------------------------m-fa
* S_CEREVISIAE QVd-g--g-m--------------------------a-fn
* Apis_mellifera QVd-g--a-a--------------------------smfg
* Aspergillus_flavus QVd-ggps-a--------------------------m-fn
* Aspergillus_fumigatus QVd-ggps-a--------------------------m-fn
* Bovine QVd-g--a-a--------------------------m-fa
* C_elegans QVdgg--a-S--------------------------m-fq
* Candida_albicans QVd-g-ms-g--------------------------m-fn
* Candida_glabrata QVd-g--g-m--------------------------s-fn
* Canis_lupus QVd-g--a-a--------------------------m-fa
* Chaetomium_globosum QVd-ggps-a--------------------------m-fn
* Coccidioides_immitis QVe-ggps-a--------------------------m-fn
* Coprinus_cinereus tpd-a--apg--------------------------p-ya
* Cricetulus_griseus QVd-g--a-a--------------------------m-ft
* Cryptococcus_neoformans QVd-g--g-q--------------------------f-av
* Danio_rerio QVd-g--a-a--------------------------m-fs
* Debaryomyces_hansenii QVd-g--asa--------------------------m-fn
* D_melanogaster sLd-g--a-p--------------------------g-mf
* D_pseudoobscura QLdgg--g-g--------------------------m-fv
* Emericella_nidulans QVd-ggps-a--------------------------m-fn
* Encephalitozoon_cuniculi nVd-g--avg--------------------------m-ft
* Eremothecium_gossypii QVd-g--a-a--------------------------m-fn
* Chicken QVd-g--a-a--------------------------m-fa
* Gibberella_zeae QVd-ggps-a--------------------------m-fn
* Kluyveromyces_lactis QVd-g--g-m--------------------------m-fn
* Mouse QVd-g--a-a--------------------------m-fa
* Neurospora_crassa QVd-ggps-a--------------------------m-fn
* Rabbit QVd-g--a-a--------------------------m-fa
* Pichia_angusta QVd-g--g-a--------------------------i-fn
* Rat QVd-g--a-a--------------------------m-fa
* Schizosaccharomyces_pombe QVd-g--i-S----------------------------fn
* Strongylocentrotus_purpuratus QVd-g--a-a--------------------------m-ft
* Tetraodon_nigroviridis pVs-g--v-f--------------------------k-tc
* Tribolium_castaneum QVd-g--a-a--------------------------m-fn
* Ustilago_maydis QVd-g--a-T--------------------------a-ft
* X_tropicalis QVd-g--a-a--------------------------m-fa
* Yarrowia_lipolytica QVd-g--a-v----------------------------fn
* X_laevis-RA51A QVd-g--a-a--------------------------m-fa
* X_laevis-RA51B QVd-g--a-a--------------------------m-fa
Cryptosporidium_hominis KVd-a--m-a--------------------------a-mf
Cryptosporidium_parvum KVd-a--m-a--------------------------a-mf
Dictyostelium_discoideum sVd-g--agg--------------------------m-fn
Entamoeba_histolytica QVd-g-qa-S--------------------------m-fg
Leishmania_donovani nVd-g--saq--------------------------m-fq
Leishmania_tropica nVd-g--s-a---------------------q----m-fq
Plasmodium_berghei KVd-a--m-S--------------------------m-fg
Plasmodium_falciparum KVd-a--m-S--------------------------m-fg
Tetrahymena_thermophila QVd-g--a-a--------------------------m-fa
Theileria_annulata RVd-a--m-Stffgilllyiiiycyilinickfyidk-fv
Theileria_parva KVd-a--m-S--------------------------t-ff
Trypanosoma_brucei nVd-g--a-ap-------------------------t-fq
Trypanosoma_cruzi nVd-g--s-a---------------------q----m-fq
P Arabidopsis_thaliana QVd-g--s-a--------------------------l-fa
P Oryza_sativa QVd-g--s-a--------------------------m-fa
P Maize-R51A1 QVd-g--s-a--------------------------m-fa
P Maize-R51A2 QVd-g--a-a--------------------------m-fa
============================================================================
B E_COLI KIgVmFG--Npetttggnalkfya----------------
B MYCOBACTERIUM_SMEGMATIS KIgVmFG--Spetttggkalkfya----------------
B MYCOBACTERIUM_TUBERCULOSIS KIgVmFG--Spetttggkalkfya----------------
B Acinetobacter_calcoaceticus KIgVmFG--Spetttggnalkfya----------------
B Actinobacillus_pleuropneumoniae KIgVmFG--Npetttggnalkfya----------------
B Actinobacillus_succinogenes KIgVmFG--Npetttggnalkfys----------------
B Actinomyces_bovis KIgVmFG--Spetttggkalkfya----------------
B Azotobacter_vinelandii KIgVmFG--Npetttganalkfya----------------
B Bacillus_clausii KVgVmFG--Npettpggralkfys----------------
B Bacillus_halodurans KVgVmFG--Npettpggralkfys----------------
B Bacillus_licheniformis KVgVmFG--Npettpggralkfys----------------
B Bacillus_megaterium KVgVmFG--Npettpggralkfys----------------
B Bacillus_subtilis KVgVmFG--Npettpggralkfys----------------
B Bordetella_pertussis KIgVmFG--Npetttggnalkfys----------------
B Burkholderia_fungorum KIgVmFG--Npetttggnalkfya----------------
B Chromobacterium_violaceum KIgVmFG--Npetttggnalkfya----------------
B Clostridium_acetobutylicum KVgImFG--Npettpggralkfya----------------
B Clostridium_thermocellum KVgVmFG--Npettpggralkfya----------------
B Colwellia_psychrerythraea KIgVmFG--Spetttggnalkfya----------------
B Corynebacterium_efficiens KIgVmFG--Spetttggkalkfya----------------
B Desulfotalea_psychrophila KIgVmFG--Spetttggnalkfyc----------------
B Enterococcus_faecalis KVgVmFG--Npettpggralkfya----------------
B Haemophilus_ducreyi KIgVmFG--Npetttggnalkfya----------------
B Haemophilus_influenzae KIgVmFG--Npetttggnalkfys----------------
B Histophilus_somni KIgViFG--Npetttggnalkfya----------------
B Kineococcus_radiotolerans KIgVmFG--Spetttggkalkfya----------------
B Leifsonia_xyli KVgVfFG--Spettaggkalkfya----------------
B Mannheimia_succiniciproducens KIgVmFG--Npetttggnalkfys----------------
B Nitrosomonas_europaea KIgViFG--Npetttggnalkfya----------------
B Nitrosomonas_eutropha KIgVmFG--Npetttggnalkfya----------------
B Oceanobacillus_iheyensis KVgVmFG--Npettpggralkfys----------------
B Pasteurella_multocida KIgVmFG--Npetttggnalkfya----------------
B Photobacterium_profundum KIgVmFG--Npetttggnalkfya----------------
B Photorhabdus_luminescens KIgVmFG--Npetttggnalkfya----------------
B Proteus_mirabilis KIgVmFG--Npetttggnalkfya----------------
B Pseudomonas_cepacia KIgVmFG--Npetttggnalkfys----------------
B Pseudomonas_pseudomallei KIgVmFG--Npetttggnalkfys----------------
B Shewanella_amazonensis KIgVmFG--Npetttggnalkfya----------------
B Shewanella_putrefaciens KIgVmFG--Npetttggnalkfya----------------
B Streptomyces_avermitilis KIgVmFG--Spetttggralkfya----------------
B Vibrio_alginolyticus KIgVmFG--Npetttggnalkfya----------------
B Vibrio_angustum KIgVmFG--Npetttggnalkfya----------------
B Vibrio_cholerae KIgVmFG--Npetttggnalkfya----------------
B Vibrio_fischeri KIgVmFG--Npetttggnalkfya----------------
B Vibrio_parahaemolyticus KIgVmFG--Npetttggnalkfya----------------
B Vibrio_splendidus KIgVmFG--Npetttggnalkfya----------------
B Vibrio_vulnificus KIgVmFG--Npetttggnalkfya----------------
B Yersinia_enterocolitica KIgVmFG--Npetttggnalkfya----------------
B Cupriavidus_metallidurans-Q1LR74 KIgVmFG--Spetttggnalkfya----------------
B Cupriavidus_metallidurans-RECA KIgVmFG--Spetttggnalkfya----------------
B Erwinia_carotovora-RECA KIgVmFG--Npetttggnalkfya----------------
B Erwinia_carotovora-RECA_ERWCT KIgVmFG--Npetttggnalkfya----------------
B Listeria_monocytogenes-RECA KVgVmFG--Npeitpggralkfys----------------
B Listeria_monocytogenes-RECA_LISMF KVgVmFG--Npeitpggralkfys----------------
B Neisseria_gonorrhoeae-RECA KIgVmFG--Spetttggnalkfys----------------
B Neisseria_gonorrhoeae-RECA_VAR KIgVmFG--Spetttggnalkfys----------------
B Salmonella_typhi-RECA KIgVmFG--Npetttggnalkfya----------------
B Salmonella_typhi-RECA_SALPA KIgVmFG--Npetttggnalkfya----------------
B Streptomyces_coelicolor-RECA KIgVmFG--Spetttggralkfya----------------
B Streptomyces_coelicolor-RECA_STRL KIgVmFG--Spetttggralkfya----------------
B Xylella_fastidiosa-RECA KIgVmmpgqSpetttggnalkfya----------------
B Xylella_fastidiosa-RECA_XYLFT KIgImmpgqSpetttggnalkfya----------------
B Yersinia_pestis-RECA KIgVmFG--Npetttggnalkfya----------------
B Yersinia_pestis-RECA_YERPS KIgVmFG--Npetttggnalkfya----------------
B Mycobacterium_tuberculosis-RECA KIgVmFG--Spetttggkalkfya----------------
B Mycobacterium_tuberculosis-RECA_M KIgVmFG--Spetttggkalkfya----------------
B Neisseria_meningitidis-RECA KIgVmFG--Spetttggnalkfys----------------
B Neisseria_meningitidis-RECA_NEIMA KIgVmFG--Spetttggnalkfys----------------
B Neisseria_meningitidis-RECA_VAR KIgVmFG--Spetttggnalkfys----------------
B Xanthomonas_vasicola-RECA_XANAC KIgVmmpgqSpevttggnalkfya----------------
B Xanthomonas_vasicola-RECA_XANCP KIgVmmpgqSpevttggnalkfya----------------
B Xanthomonas_vasicola-YP_201580 KIgVmmpgqSpevttggnalkfya----------------
B Pseudomonas_aeruginosa-Q48F94 KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA KIgVmFG--Npetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEF5 KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEFL KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEPK KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEPU KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSESM KIgVmFG--Spetttggnalkfya----------------
============================================================================
B DEINOCOCCUS_RADIODURANS KIgVmYGnpetttggralkfya------------------
B Deinococcus_geothermalis KIgVmYGnpetttggralkfya------------------
B Thermus_aquaticus-RECA KVgVmYGnpettpggralkfys------------------
B Thermus_aquaticus-RECA_THET2 KVgVtYGnpettpggralkfya------------------
B Thermus_aquaticus-RECA_THET8 KVgVtYGnpettpggralkfya------------------
B Thermus_aquaticus-RECA_THETH KVgVtYGnpettpggralkfya------------------
============================================================================
Consensus kixvxfgxxsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
530 540 550 560
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxSlRLnLKKxqxxxxxxxxxxxdqr
============================================================================
A PYROCOCCUS_FURIOSUS ----------------TLRVyLRKgKg----------gKR
A Archaeoglobus_fulgidus ----------------TfRIyLKKgKd----------DlR
A Pyrococcus_abyssi ----------------TLRVyLRKgKg----------gKR
============================================================================
A METHANOCOCCUS_VOLTAE ----------------TfRffVRKgKg----------DKR
A Methanococcus_jannaschii ----------------TfRIfLRKaKg----------DKR
A Methanococcus_maripaludis ----------------TfRffLRKsKg----------DKR
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------gIRIqLKKsRg----------NRR
A Desulfurococcus_amylolyticus ----------------gVRIqLRKsKg----------NKR
A Sulfolobus_acidocaldarius ----------------gIRVqLKKsRg----------NKR
A Sulfolobus_tokodaii ----------------gIRVqLKKsRg----------NKR
A Aeropyrum_pernix-RADA ----------------gVRVyLKKsRg----------NKR
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------gVRVyLKKsRg----------NKR
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------gVRVyLKKsRg----------NKR
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------gVRVyLKKsRg----------DKR
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------gVRVyLKKgRg----------NKR
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------gVRVyLKKsRg----------sKR
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------gVRVyLKKsRg----------NKR
============================================================================
* HUMAN adpkkpiggniiahasTtRLyLRKgRg----------EtR
* S_CEREVISIAE pdpkkptggnimahssTtRLgfKKgKg----------cQR
* Apis_mellifera gdqkkpigghiiahasTtRLyLRKgRg----------EtR
* Aspergillus_flavus pdpkkpiggniiahasTtRLSLKKgRg----------EtR
* Aspergillus_fumigatus pdpkkpiggniiahasTtRLSLKKgRg----------EtR
* Bovine adpkkpiggniiahasTtRLyLRKgRg----------EtR
* C_elegans adakkpigghiiahmsTtRLyLRKgKg----------EnR
* Candida_albicans pdpkkpiggniiahssTtRLSfKKgRg----------EtR
* Candida_glabrata pdpkkpiggnimahssTtRLgfKKgKg----------cQR
* Canis_lupus adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Chaetomium_globosum pdpkkpiggnimahssTtRISLKKgRg----------EtR
* Coccidioides_immitis pdpkkpiggniiahasTtRLSLKKgRg----------EtR
* Coprinus_cinereus gnekkpiggnimahasTtRLqLKKgRg----------NtR
* Cricetulus_griseus adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Cryptococcus_neoformans adakkpiggnimahasTtRLNLRKgRg----------tsR
* Danio_rerio adpkkpiggnilahasTtRLyLRKgRg----------EtR
* Debaryomyces_hansenii pdpkkpiggniiahssTtRLSfKKgRa----------EQR
* D_melanogaster -dakkpigghimahssTtRLyLRKgKg----------EtR
* D_pseudoobscura adakkpvgghilahasTtRLyLRKgKg----------EtR
* Emericella_nidulans pdpkkpiggniiahasTtRLSLKKgRg----------EtR
* Encephalitozoon_cuniculi gdikkpiggnimahasTtRLyLRKgRg----------EtR
* Eremothecium_gossypii pdpkkpiggnimahssTtRLgfKKgKg----------cQR
* Chicken adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Gibberella_zeae pdpkkpiggniiahasTtRISLKKgRa----------EtR
* Kluyveromyces_lactis pdpkkpfggnimahssTtRLgfKKgKg----------pQR
* Mouse adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Neurospora_crassa pdpkkpiggniiahasTtRISLKKgRg----------EtR
* Rabbit adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Pichia_angusta pdpkkpiggnivahssTtRLyfKKaKg----------anR
* Rat adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Schizosaccharomyces_pombe pdpkkpiggnilahssTtRLSLRKgRg----------EQR
* Strongylocentrotus_purpuratus sdpkkpigghimahasTtRLyLRKgRg----------EtR
* Tetraodon_nigroviridis gygiteetsefvqlvlfavctLRKgRg----------EtR
* Tribolium_castaneum adpkkpiggnimahssTtRLSLRKgRg----------EaR
* Ustilago_maydis adakkpiggnivahasTtRLSLRKgRg----------NQR
* X_tropicalis adpkkpiggniiahasTtRLyLRKgRg----------EtR
* Yarrowia_lipolytica pdpkkpiggnivahasTtRLyfKKgRg----------vQR
* X_laevis-RA51A adpkkpiggniiahasTtRLyLRKgRg----------EtR
* X_laevis-RA51B adpkkpiggniiahasTtRLyLRKgRg----------EtR
Cryptosporidium_hominis qndkvpiggniiahasqtRLfLKKgRg----------EtR
Cryptosporidium_parvum qndkvpiggniiahasqtRLfLKKgRg----------EtR
Dictyostelium_discoideum pdpkkpigghimahssTtRLSLRKgKg----------EmR
Entamoeba_histolytica gdtkkpvggniiahasTtRLyLRKgKg----------EaR
Leishmania_donovani adskkpigghimahasTtRLSLRKgRg----------EQR
Leishmania_tropica adskkpigghimahasTtRLSLRKgRg----------EQR
Plasmodium_berghei ghekipiggniiahasqtRLyLRKgRg----------EsR
Plasmodium_falciparum ghekipiggniiahasqtRLyLRKgRg----------EsR
Tetrahymena_thermophila gdmkkpiggnimahasTtRLyLRKgRg----------EsR
Theileria_annulata gndklpvgghiiahasqtRLfLRQsKg----------EsR
Theileria_parva gndklpvgghiiahasqtRLfLRQsKg----------EsR
Trypanosoma_brucei adskkpigghimahasTtRLSLRKgRg----------EQR
Trypanosoma_cruzi adakkpigghimahasTtRLSLRKgRg----------EQR
P Arabidopsis_thaliana gpqfkpiggnimahatTtRLaLRKgRa----------EER
P Oryza_sativa gpqikpiggnimahasTtRLaLRKgRg----------EER
P Maize-R51A1 gpqfkpiggnimahasTtRLaLRKgRg----------EER
P Maize-R51A2 gpqikpiggnimahasTtRLfLRKgRg----------EER
============================================================================
B E_COLI ----------------SVRLDIRRigavkegenvvg-sEt
B MYCOBACTERIUM_SMEGMATIS ----------------SVRLDVRRiEtlkdgtdavg-NRt
B MYCOBACTERIUM_TUBERCULOSIS ----------------SVRMDVRRiEtlkdgtnavg-NRt
B Acinetobacter_calcoaceticus ----------------SVRLDIRRigqvkegdeiig-sEt
B Actinobacillus_pleuropneumoniae ----------------SVRLDIRRsgvvkdgdevvg-sEt
B Actinobacillus_succinogenes ----------------SVRLDIRRigsvkagdeiig-NEt
B Actinomyces_bovis ----------------SVRLDVRRiEtlkdgsdavg-NRt
B Azotobacter_vinelandii ----------------SVRLDIRRtgavkesdevig-sEt
B Bacillus_clausii ----------------SVRLeVRRaEalkqgneivg-NRt
B Bacillus_halodurans ----------------SVRLeVRRaEtlkqgndmvg-NKt
B Bacillus_licheniformis ----------------SVRLeVRRaEqlkqgndvmg-NKt
B Bacillus_megaterium ----------------SVRLeVRRaEqlkqgndivg-NKt
B Bacillus_subtilis ----------------SVRLeVRRaEqlkqgndvmg-NKt
B Bordetella_pertussis ----------------SVRLDIRRigaikkgdevvg-NEt
B Burkholderia_fungorum ----------------SVRLDIRRigsikkndevig-NEt
B Chromobacterium_violaceum ----------------SVRLDIRRtggikkgdevig-Ndt
B Clostridium_acetobutylicum ----------------SVRMDIRKidtikqgeemig-NRv
B Clostridium_thermocellum ----------------SVRLDVRRlEsikqgnevig-sRt
B Colwellia_psychrerythraea ----------------SVRLDIRRigavkngdeivg-NEt
B Corynebacterium_efficiens ----------------SVRIDVRRiQtlkdgqdaig-NRt
B Desulfotalea_psychrophila ----------------SeRLDIRRigaikdgqeitg-NRt
B Enterococcus_faecalis ----------------TVRLeVRRaEqlkqgtdivg-NRt
B Haemophilus_ducreyi ----------------SVRLDIRRsgvvkdgdevvg-sEt
B Haemophilus_influenzae ----------------SVRLDIRRtgsvkdgeniig-NEt
B Histophilus_somni ----------------SVRLDIRRvgsikngdevig-NEt
B Kineococcus_radiotolerans ----------------SVRLDVRRiEtlkdgtnpvg-NRt
B Leifsonia_xyli ----------------SVRLDIRRiEtlkdgtdavg-NRt
B Mannheimia_succiniciproducens ----------------SVRLDIRRvgavkdgdeiig-NEt
B Nitrosomonas_europaea ----------------SVRLDIRRtgsikrgeemvg-NEt
B Nitrosomonas_eutropha ----------------SVRLDIRRtgsikrgeeivg-NEt
B Oceanobacillus_iheyensis ----------------SVRLeVRRaEtlklgndavg-NKa
B Pasteurella_multocida ----------------SVRLDIRRtgaikegeevig-NEt
B Photobacterium_profundum ----------------SVRLDIRRtgaikdgdevvg-NEt
B Photorhabdus_luminescens ----------------SVRLDIRRigsvkngeevvg-sEt
B Proteus_mirabilis ----------------SVRLDIRRigsvkngdevig-sEt
B Pseudomonas_cepacia ----------------SVRLDIRRigsikkndevig-NEt
B Pseudomonas_pseudomallei ----------------SVRLDIRRigsikkndevig-NEt
B Shewanella_amazonensis ----------------SVRLDIRRtgaikegdevvg-NEt
B Shewanella_putrefaciens ----------------SVRLDIRRtgaikegdevvg-NEt
B Streptomyces_avermitilis ----------------SVRLDIRRiEtlkdgtdavg-NRt
B Vibrio_alginolyticus ----------------SVRLDIRRtgaikegdevvg-NEt
B Vibrio_angustum ----------------SVRLDIRRtgaikegdevvg-NEt
B Vibrio_cholerae ----------------SVRLDIRRtgaikegeevvg-NEt
B Vibrio_fischeri ----------------SVRLDIRRtgavkdgdevvg-NEt
B Vibrio_parahaemolyticus ----------------SVRLDIRRtgaikegdevvg-NEt
B Vibrio_splendidus ----------------SVRLDIRRtgaikdgdevvg-NEt
B Vibrio_vulnificus ----------------SVRLDIRRtgaikegdevvg-NEt
B Yersinia_enterocolitica ----------------SVRLDIRRigavkdgdvvvg-sEt
B Cupriavidus_metallidurans-Q1LR74 ----------------SVRLDIRRigsikkgdevvg-NEt
B Cupriavidus_metallidurans-RECA ----------------SVRLDIRRigsikkgdevvg-NEt
B Erwinia_carotovora-RECA ----------------SVRLDIRRigsvkngdevvg-sEt
B Erwinia_carotovora-RECA_ERWCT ----------------SVRLDIRRtgaikegeevvg-sEt
B Listeria_monocytogenes-RECA ----------------TVRLeVRRaEqlkqgtdvmg-NKt
B Listeria_monocytogenes-RECA_LISMF ----------------TVRLeVRRaEqlkqgtdvmg-NKt
B Neisseria_gonorrhoeae-RECA ----------------SVRLDIRRtgsikkgeevlg-NEt
B Neisseria_gonorrhoeae-RECA_VAR ----------------SVRLDIRRtgsikkgeevlg-NEt
B Salmonella_typhi-RECA ----------------SVRLDIRRigavkegdnvvg-sEt
B Salmonella_typhi-RECA_SALPA ----------------SVRLDIRRigavkegdnvvg-sEt
B Streptomyces_coelicolor-RECA ----------------SVRLDIRRiEtlkdgtdavg-NRt
B Streptomyces_coelicolor-RECA_STRL ----------------SVRLDIRRiEtlkdgtdavg-NRt
B Xylella_fastidiosa-RECA ----------------SVRLDIRRigaikkgdeiig-NQt
B Xylella_fastidiosa-RECA_XYLFT ----------------SVRLDIRRigaikkgdeiig-NQt
B Yersinia_pestis-RECA ----------------SVRLDIRRigavkdgdvvvg-sEt
B Yersinia_pestis-RECA_YERPS ----------------SVRLDIRRigavkdgdvvvg-sEt
B Mycobacterium_tuberculosis-RECA ----------------SVRMDVRRvEtlkdgtnavg-NRt
B Mycobacterium_tuberculosis-RECA_M ----------------SVRMDVRRiEtlkdgtnavg-NRt
B Neisseria_meningitidis-RECA ----------------SVRLDIRRtgsikkgeevlg-NEt
B Neisseria_meningitidis-RECA_NEIMA ----------------SVRLDIRRtgsikkgeevlg-NEt
B Neisseria_meningitidis-RECA_VAR ----------------SVRLDIRRtgsikkgeevlg-NEt
B Xanthomonas_vasicola-RECA_XANAC ----------------SVRLDIRRigaikkgdeiig-NQt
B Xanthomonas_vasicola-RECA_XANCP ----------------SVRLDIRRigaikkgdeiig-NQt
B Xanthomonas_vasicola-YP_201580 ----------------SVRLDIRRigaikkgdeiig-NQt
B Pseudomonas_aeruginosa-Q48F94 ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------SVRLDIRRtgavkegdevvg-sEt
B Pseudomonas_aeruginosa-RECA_PSESM ----------------SVRLDIRRtgavkegdevvg-sEt
============================================================================
B DEINOCOCCUS_RADIODURANS ----------------SVRLDVRKigqptkvgndavaNtv
B Deinococcus_geothermalis ----------------SVRLDVRKigqpvklgndavgNtv
B Thermus_aquaticus-RECA ----------------SVRLDVRKsgqpikvgneavgiKv
B Thermus_aquaticus-RECA_THET2 ----------------SVRLDVRKsgqpikvgneavgvKv
B Thermus_aquaticus-RECA_THET8 ----------------SVRLDVRKsgqpikvgneavgvKv
B Thermus_aquaticus-RECA_THETH ----------------SVRLDVRKsgqpikvgneavgvKv
============================================================================
Consensus xxxxxxxxxxxxxxxxSlRLnLKKxqxxxxxxxxxxxdqr
570 580 590 600
----:----|----:----|----:----|----:----|
Consensus xvRVvxspvlpxexEaxfxIxxxeGInnxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS iaRLIdaPhLP-EgEAvFsIt-eKGIeD------------
A Archaeoglobus_fulgidus iaRLIdSPhLP-EgEAiFrVt-erGIeDa-eekdkkkrk-
A Pyrococcus_abyssi vaRLIdaPhLP-EgEAvFrIt-eKGIeD------------
============================================================================
A METHANOCOCCUS_VOLTAE vaKLydSPhLP-DaEAiFrIt-eKGIqD------------
A Methanococcus_jannaschii vaKLydSPhLP-DaEAmFrIt-eKGIHD------------
A Methanococcus_maripaludis vaKLydSPhLP-DsEAvFrIt-eKGIqD------------
============================================================================
A SULFOLOBUS_SOLFATARICUS iaRVVdaPhLP-EgEvvFaLt-eEGIrD--ae--------
A Desulfurococcus_amylolyticus iaRVVdaPhLP-EgEvvFvIt-eEGIrD--se--------
A Sulfolobus_acidocaldarius iaRIVdaPhLP-EgEvvFaIt-eEGVrD--ae--------
A Sulfolobus_tokodaii iaRIVdaPhLP-EgEvvFaIt-eEGVrD--ae--------
A Aeropyrum_pernix-RADA iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_OH1 iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_OH2 iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_OH3 iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_TB1 iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_TB2 iaRVVdaPhLP-EgEtvFaIt-ewGIrD--pe--------
A Aeropyrum_pernix-RADA_VAR_TB6 iaRVVdaPhLP-EgEAvFaIt-ewGIrD--pe--------
============================================================================
* HUMAN icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* S_CEREVISIAE lcKVVdSPcLP-EaEcvFaIy-eDGVgD---p-r------
* Apis_mellifera icKIydSPcLP-EsEAmFaIn-aDGIgD---v-k------
* Aspergillus_flavus vcKIydSPcLP-EsDclFaIn-eDGIgDp-sp-k------
* Aspergillus_fumigatus vcKIydSPcLP-EsDclFaIn-eDGIgDp-sp-k------
* Bovine icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* C_elegans vaKMVqSPnLP-EaEAtYsIt-nhGIeD---a-r------
* Candida_albicans icKIydSPcLP-EsEciFaIy-eDGIgD---p-k------
* Candida_glabrata ycKVVdSPcLP-EaEcvFaIy-eDGIgD---p-r------
* Canis_lupus icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Chaetomium_globosum iaKIydSPcLP-EgDAlFaIn-eDGIgDp--spk------
* Coccidioides_immitis icKIydSPcLP-EsDclFaIn-eDGIgDp-sp-k------
* Coprinus_cinereus acKIydSPcLP-EsEttFaIl-pgGIgD---p-e------
* Cricetulus_griseus icKVydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Cryptococcus_neoformans vcKIVdSPcLP-EaEAiFaIn-pnGIgD---p-e------
* Danio_rerio icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Debaryomyces_hansenii icKIydSPcLP-EsEcvFaIy-eDGIgD---p-k------
* D_melanogaster icKIydSPcLP-EsEAmFaIl-pDGIgD---a-r------
* D_pseudoobscura icKIydSPcLP-EsEAmFaIl-pDGIgD---a-k------
* Emericella_nidulans vcKIydSPcLP-EsDclFaIn-eDGIgDp-sp-k------
* Encephalitozoon_cuniculi icKIydSPcLP-EsEAvFaIt-eQGIND---p-d------
* Eremothecium_gossypii lcKVVdSPcLP-EaEcvFaIy-eDGIgD---p-r------
* Chicken icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Gibberella_zeae iaKIydSPcLP-EsDtlFaIg-eEGIgDp-ap-k------
* Kluyveromyces_lactis ycKVVdSPcLP-EaEcvFaIy-eDGIgD---p-r------
* Mouse icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Neurospora_crassa iaKIydSPcLP-EsDclFaIn-eDGIgDp-sp-k------
* Rabbit icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Pichia_angusta icKIydSPcLa-EsEtvFaLg-qgGViD---p-s------
* Rat icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Schizosaccharomyces_pombe icKIydSPcLP-EsEAiFaIn-sDGVgD---p-k------
* Strongylocentrotus_purpuratus icKIydSPcLP-EaEAmFaIn-pDGVgD---a-k------
* Tetraodon_nigroviridis icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Tribolium_castaneum vcKIydSPcLP-EsEAiFaIr-pDGIgD---v-q------
* Ustilago_maydis icRIadSPcLP-EaDAvFaIg-pEGIiD---p-v------
* X_tropicalis icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* Yarrowia_lipolytica icKIydSPcLP-EsgcvFaIh-eDGIgD---p-k------
* X_laevis-RA51A icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
* X_laevis-RA51B icKIydSPcLP-EaEAmFaIn-aDGVgD---a-k------
Cryptosporidium_hominis icKIydSPnLP-EgDAtFsIt-egGIND---p-k------
Cryptosporidium_parvum icKIydSPnLP-EgDAtFsIt-egGIND---p-k------
Dictyostelium_discoideum icKIydSPsLP-EsEkpFgIy-sDGISD---y-k------
Entamoeba_histolytica icKVydSPcLP-EsEAsFaIt-tnGIeD---v-k------
Leishmania_donovani iIKVydSPcLa-EaEAiFgIy-dDGVgD---a-r------
Leishmania_tropica iIKVydSPcLa-EaEAiFgIy-dDGVgD---a-r------
Plasmodium_berghei icKIydSPVLP-EgEAvFaIt-egGIaD---y-e------
Plasmodium_falciparum icKIydSPVLP-EgEAvFaIt-egGIaD---y-e------
Tetrahymena_thermophila icKIydSPcLP-EsEAiYaIg-kgGIeD---f-n------
Theileria_annulata icKVydSPVLP-EgEAvFaIt-dgGIND---y-h------
Theileria_parva icKIydSPVLP-EgEAvFaIt-dgGIND---y-h------
Trypanosoma_brucei iIKVydSPcLa-EsEAiFgIy-enGVgD---v-r------
Trypanosoma_cruzi iMKVydSPcLa-EaEAiFgIy-eDGVgD---a-r------
P Arabidopsis_thaliana icKVIsSPcLP-EaEArFqIs-tEGVtD---c-k------
P Oryza_sativa icKVIsSPcLa-EaEArFqIa-sEGVaD---v-k------
P Maize-R51A1 icKVIsSPcLa-EaEArFqLa-sEGIaD---v-k------
P Maize-R51A2 icKVIsSPcLa-EaEArFqIs-sEGVtD---v-k------
============================================================================
B E_COLI rVKVVkNkIaapfkQAeFqIlygEGINf-yge-------l
B MYCOBACTERIUM_SMEGMATIS rVKVVkNkVsPpfkQAeFdIlygQGISr-egs-------l
B MYCOBACTERIUM_TUBERCULOSIS rVKIVkNkxsPpfkQAeFdIlygrGISr-egs-------l
B Acinetobacter_calcoaceticus kVKVVkNkMaPpfrEAiFqIlygKGVNq-lge-------l
B Actinobacillus_pleuropneumoniae kVKIVkNkVaPpfrEvqFdImygEGISr-mne-------l
B Actinobacillus_succinogenes rVKVVkNkLaapfrtvdFqImygEGISk-nge-------l
B Actinomyces_bovis rVKVVkNkVsPpfkQAeFdIlygQGISk-egs-------l
B Azotobacter_vinelandii rVKVVkNkVaPpfrQAeFqIlygKGIyr-nge-------i
B Bacillus_clausii kIKVVkNkVaPpfrlAevdImygEGISr-egs-------m
B Bacillus_halodurans kIKVVkNkVaPpfkQAevdImygEGISr-egs-------i
B Bacillus_licheniformis kIKVVkNkVaPpfrtAevdImygEGISk-ege-------i
B Bacillus_megaterium rIKVVkNkVaPpfraAevdImygEGISk-ege-------i
B Bacillus_subtilis kIKVVkNkVaPpfrtAevdImygEGISk-ege-------i
B Bordetella_pertussis rVKVVkNkVaPpfkQAeFdImygsGISr-ege-------i
B Burkholderia_fungorum rVKVVkNkVsPpfrEAiFdIlygEGISr-qge-------i
B Chromobacterium_violaceum rVKVVkNkVsPpfrQAdFeIlygEGISr-qge-------i
B Clostridium_acetobutylicum rVKVVkNkVaPpfkQAeFdImynEGISr-egn-------i
B Clostridium_thermocellum kVKVVkNkVaPpfkEAeFdIiygQGISk-egn-------i
B Colwellia_psychrerythraea rVKVVkNkIaPpfkQAeFqIlygEGINN-lge-------l
B Corynebacterium_efficiens raKIVkNkVsPpfkiAeFdIiygEGISr-ess-------i
B Desulfotalea_psychrophila rVKVVkNkVaPpfkiAeFdIiygEGISk-igd-------m
B Enterococcus_faecalis kIKVVkNkVaPpfkvAevdImygQGISq-ege-------l
B Haemophilus_ducreyi kVKIVkNkVaPpfrEvqFdImygEGIar-mne-------l
B Haemophilus_influenzae rVKVVkNkLaapfrQvdFqIlygEGISk-age-------l
B Histophilus_somni rVKVVkNkVaPpfrQvdFqIlygEGISr-nge-------l
B Kineococcus_radiotolerans rVKVVkNkVsPpfkQAeFdIiygQGISr-egg-------l
B Leifsonia_xyli rVKVVkNkMaPpfkQAeFdIlygvGISH-egs-------l
B Mannheimia_succiniciproducens rVKVVkNkLaPpfrQvdFqIlygEGISk-nge-------l
B Nitrosomonas_europaea rVKIVkNkVaPpfkQAdFdIlygEGISr-ese-------i
B Nitrosomonas_eutropha rVKVVkNkVaPpfkQAdFaIlygEGISr-ese-------i
B Oceanobacillus_iheyensis rIKVVkNkVaPpfkQAevdImygKGISk-ege-------v
B Pasteurella_multocida rVKVVkNkVaapfrQvdFqIlygQGISk-tge-------l
B Photobacterium_profundum rIKVVkNkIaapfkQAetqIlygQGfNr-nge-------l
B Photorhabdus_luminescens rVKVVkNkVaapfkQAeFqImygEGINt-yge-------l
B Proteus_mirabilis rVKVVkNkVaapfkQAeFqImygEGINt-yge-------l
B Pseudomonas_cepacia rVKVVkNkVsPpfrEAiFdIlygEGISr-qge-------i
B Pseudomonas_pseudomallei rVKVVkNkVsPpfrEAiFdIlygEGISr-qge-------i
B Shewanella_amazonensis rVKVVkNkIaapfrQAdFqIlygQGINr-tge-------l
B Shewanella_putrefaciens rVKVVkNkVaapfkQAeFqIlygQGINr-tge-------l
B Streptomyces_avermitilis rVKVVkNkVaPpfkQAeFdIlygQGISr-egg-------l
B Vibrio_alginolyticus rIKVVkNkIaapfkEAntqImygQGfNr-ege-------l
B Vibrio_angustum rIKVVkNkIaapfkQAetqIlygQGfNr-nge-------l
B Vibrio_cholerae rIKVVkNkIaapfkEAntqImygQGfNr-ege-------l
B Vibrio_fischeri rIKVVkNkIaapfkQAetqImygQGfNr-ege-------l
B Vibrio_parahaemolyticus rIKVVkNkIaapfkEAntqImygQGfNr-ege-------l
B Vibrio_splendidus rIKVVkNkIaapfkQAetqIlygKGfNr-ege-------l
B Vibrio_vulnificus rIKVVkNkIaapfkEAntqImygQGfNr-ege-------l
B Yersinia_enterocolitica rVKVVkNkIaapfkQAeFqIlygEGINi-nge-------l
B Cupriavidus_metallidurans-Q1LR74 kVKVVkNkVsPpfrEAfFdIlygQGISr-qge-------i
B Cupriavidus_metallidurans-RECA kVKVVkNkVsPpfrEAfFdIlygQGISr-qge-------i
B Erwinia_carotovora-RECA rVKVVkNkIaapfkQAeFqImygEGINt-fge-------l
B Erwinia_carotovora-RECA_ERWCT rVKVVkNkVaapfkQAeFqIlygEGINi-hge-------l
B Listeria_monocytogenes-RECA kIKVVkNkVaPpfriAevdImygEGISr-ege-------l
B Listeria_monocytogenes-RECA_LISMF kIKVVkNkVaPpfriAevdImygEGISr-ege-------l
B Neisseria_gonorrhoeae-RECA rVKVIkNkVaPpfrQAeFdIlygEGISw-ege-------l
B Neisseria_gonorrhoeae-RECA_VAR rVKVIkNkVaPpfrQAeFdIlygEGISw-ege-------l
B Salmonella_typhi-RECA rVKVVkNkIaapfkQAeFqIlygEGINf-yge-------l
B Salmonella_typhi-RECA_SALPA rVKVVkNkIaapfkQAeFqIlygEGINf-yge-------l
B Streptomyces_coelicolor-RECA rVKVVkNkVaPpfkQAeFdIlygQGISr-egg-------l
B Streptomyces_coelicolor-RECA_STRL rVKVVkNkVaPpfkQAeFdIlygQGISr-egg-------l
B Xylella_fastidiosa-RECA kIKVVkNkLaPpfkQvvteIlygEGISr-ege-------l
B Xylella_fastidiosa-RECA_XYLFT kIKVVkNkLaPpfkQvvteIlygEGISr-ege-------l
B Yersinia_pestis-RECA rVKVVkNkIaapfkQAeFqIlygEGINi-nge-------l
B Yersinia_pestis-RECA_YERPS rVKVVkNkIaapfkQAeFqIlygEGINi-nge-------l
B Mycobacterium_tuberculosis-RECA rVKVVkNkcsPpfkQAeFdIlygKGISr-egs-------l
B Mycobacterium_tuberculosis-RECA_M rVKIVkNkVsPpfkQAeFdIlygrGISr-egs-------l
B Neisseria_meningitidis-RECA rVKVIkNkVaPpfrQAeFdIlygEGISw-ege-------l
B Neisseria_meningitidis-RECA_NEIMA rVKVIkNkVaPpfrQAeFdIlygEGISw-ege-------l
B Neisseria_meningitidis-RECA_VAR rVKVIkNkVaPpfrQAeFdIlygEGISw-ege-------l
B Xanthomonas_vasicola-RECA_XANAC kIKVVkNkLaPpfkQvvteIlygEGISr-ege-------l
B Xanthomonas_vasicola-RECA_XANCP kIKVVkNkLaPpfkQviteIlygEGISr-ege-------l
B Xanthomonas_vasicola-YP_201580 kIKVVkNkLaPpfkQvvteIlygEGISr-ege-------l
B Pseudomonas_aeruginosa-Q48F94 rVKVVkNkVaPpfrQAeFqIlygKGIyl-nge-------i
B Pseudomonas_aeruginosa-RECA rVKVVkNkVsPpfrQAeFqIlygKGIyr-tge-------i
B Pseudomonas_aeruginosa-RECA_PSEF5 rVKIVkNkVaPpfrQAeFqIlygKGIyl-nge-------i
B Pseudomonas_aeruginosa-RECA_PSEFL rVKVVkNkVaPpfrQAeFqIlygKGIyl-nge-------m
B Pseudomonas_aeruginosa-RECA_PSEPK rVKIVkNkVsPpfrQAeFqIlygKGIyr-nge-------i
B Pseudomonas_aeruginosa-RECA_PSEPU rVKIVkNkVsPpfrQAeFqIlygKGIyr-nge-------i
B Pseudomonas_aeruginosa-RECA_PSESM rVKVVkNkVaPpfrQAeFqIlygKGIyl-nge-------i
============================================================================
B DEINOCOCCUS_RADIODURANS kIKtVkNkVaapfkEvelaLvygKGfDq-lsd-------l
B Deinococcus_geothermalis kVKtVkNkVaPpfkEveltLlygKGfDq-lsd-------l
B Thermus_aquaticus-RECA kVKVVkNkLaPpfrEAeleIyfgrGLDp-vmd-------l
B Thermus_aquaticus-RECA_THET2 rVKVVkNkLaPpfrEAeleIyfgrGLDp-vad-------l
B Thermus_aquaticus-RECA_THET8 rVKVVkNkLaPpfrEAeleIyfgrGLDp-vad-------l
B Thermus_aquaticus-RECA_THETH rVKVVkNkLaPpfrEAeleIyfgrGLDp-vad-------l
============================================================================
Consensus xvRVvxspvlpxexEaxfxIxxxeGInnxxxxxxxxxxxx
610 620 630 640
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxexnxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------------
A Archaeoglobus_fulgidus ----k-----------------------------------
A Pyrococcus_abyssi ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS ---------------------------E------------
A Desulfurococcus_amylolyticus ---------------------------Ee-----------
A Sulfolobus_acidocaldarius ---------------------------E------------
A Sulfolobus_tokodaii ---------------------------E------------
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN ---------------------------D------------
* S_CEREVISIAE ---------------------------EeD-e--------
* Apis_mellifera ---------------------------E------------
* Aspergillus_flavus ---------------------------D----lenn----
* Aspergillus_fumigatus ---------------------------D----lend----
* Bovine ---------------------------D------------
* C_elegans ---------------------------E-D----------
* Candida_albicans ---------------------------veDne--------
* Candida_glabrata ---------------------------EeD-e--------
* Canis_lupus ---------------------------D------------
* Chaetomium_globosum ---------------------------D-lek--e-----
* Coccidioides_immitis ---------------------------D---lekde----
* Coprinus_cinereus ---------------------------EeS----------
* Cricetulus_griseus ---------------------------D------------
* Cryptococcus_neoformans ---------------------------Elq-e--------
* Danio_rerio ---------------------------D------------
* Debaryomyces_hansenii ---------------------------teDd---dn----
* D_melanogaster ---------------------------Es-----------
* D_pseudoobscura ---------------------------EgH----------
* Emericella_nidulans ---------------------------D----lend----
* Encephalitozoon_cuniculi ---------------------------E------------
* Eremothecium_gossypii ---------------------------EdDe---d-----
* Chicken ---------------------------E------------
* Gibberella_zeae ---------------------------D-tekd-------
* Kluyveromyces_lactis ---------------------------EdD-d--------
* Mouse ---------------------------D------------
* Neurospora_crassa ---------------------------D-mekmnq-----
* Rabbit ---------------------------D------------
* Pichia_angusta ---------------------------Deteaaede----
* Rat ---------------------------D------------
* Schizosaccharomyces_pombe ---------------------------Eiiapv-------
* Strongylocentrotus_purpuratus ---------------------------D------------
* Tetraodon_nigroviridis ---------------------------D------------
* Tribolium_castaneum ---------------------------E------------
* Ustilago_maydis ---------------------------D------------
* X_tropicalis ---------------------------D------------
* Yarrowia_lipolytica ---------------------------Dee----------
* X_laevis-RA51A ---------------------------D------------
* X_laevis-RA51B ---------------------------D------------
Cryptosporidium_hominis ---------------------------Dek----------
Cryptosporidium_parvum ---------------------------Dek----------
Dictyostelium_discoideum ---------------------------Eq-----------
Entamoeba_histolytica ---------------------------D-D----------
Leishmania_donovani ---------------------------D------------
Leishmania_tropica ---------------------------D------------
Plasmodium_berghei ---------------------------Ek-----------
Plasmodium_falciparum ---------------------------Ek-----------
Tetrahymena_thermophila ---------------------------E------------
Theileria_annulata ---------------------------Dr-----------
Theileria_parva ---------------------------Dr-----------
Trypanosoma_brucei ---------------------------D------------
Trypanosoma_cruzi ---------------------------D------------
P Arabidopsis_thaliana ---------------------------D------------
P Oryza_sativa ---------------------------D------------
P Maize-R51A1 ---------------------------D------------
P Maize-R51A2 ---------------------------D------------
============================================================================
B E_COLI vdlgvkekliekagawysykgekigqgKaNa-----tawl
B MYCOBACTERIUM_SMEGMATIS idmgvehgfirksgswftyegeqlgqgKeNa-----rkfl
B MYCOBACTERIUM_TUBERCULOSIS idmgvdqgfirksgswftyegeqlgqgKeNa-----rtfl
B Acinetobacter_calcoaceticus vdlavqqnivqkagawysyqgnkigqgKnNv-----iryl
B Actinobacillus_pleuropneumoniae lilaeangfiqkagawfsyegtkigqgKnNa-----ikwl
B Actinobacillus_succinogenes ielgvkqklvqksgawfayegqkigqgKaNa-----mkwl
B Actinomyces_bovis idmgveqgfirksgswytyegdqlgqgKeNa-----rkfl
B Azotobacter_vinelandii idlgvqlglleksgawysyqgskigqgKaNa-----akfl
B Bacillus_clausii ldiaseldiveksgawysykgdrlgqgreNs-----kqfl
B Bacillus_halodurans ldiaseldivqksgawysfnderlgqgreNa-----kqfl
B Bacillus_licheniformis idlgteldivqksgawysyqeerlgqgreNa-----kqfl
B Bacillus_megaterium ldiaseldivqksgswysynderlgqgreNa-----kqfl
B Bacillus_subtilis idlgteldivqksgswysyeeerlgqgreNa-----kqfl
B Bordetella_pertussis idlgvqanvvdksgawysysgnrigqgKdNv-----reyl
B Burkholderia_fungorum idlgvqakivdkagawysysgerigqgKdNa-----refl
B Chromobacterium_violaceum ielgvkhgfidksgawyayngqkigqgKdNt-----rewl
B Clostridium_acetobutylicum vdvgvkeniiqksgawfsygdirlgqgreNa-----klff
B Clostridium_thermocellum ldvavnldivnksgawfsyngqkigqgreNa-----kqfl
B Colwellia_psychrerythraea ielgvkhefvekagawyscngerigqgKaNa-----akyl
B Corynebacterium_efficiens idlavdngivkksgswftyegdqlgqgKeka-----rlfl
B Desulfotalea_psychrophila fdlavgldiidksgswysyknerigqgreNs-----kqfl
B Enterococcus_faecalis ldmavekdlisksgawygykeerigqgreNa-----kqym
B Haemophilus_ducreyi lilaeangfiqkagawfsyngtkigqgKnNa-----ikwl
B Haemophilus_influenzae lelgvkhklveksgawysyngekigqgKaNs-----mkwl
B Histophilus_somni ielgvkhklvnksgawfsyegekigqgKtNa-----mkwl
B Kineococcus_radiotolerans idlgvehgfvrksgawytyegdqlgqgKeNa-----rafl
B Leifsonia_xyli ldfgvehalvkksgawytyegdqlgqgKeNs-----rnfl
B Mannheimia_succiniciproducens ielgvkhklvdksgawyayngdkigqgKaNa-----mkwl
B Nitrosomonas_europaea ielgvlhkliekagawysyngekigqgKdNv-----rdyl
B Nitrosomonas_eutropha ielgvlhkliekagawysyngekigqgrdNv-----rdyl
B Oceanobacillus_iheyensis ldigsdldivmksgawysynndrlgqgreNa-----kqyl
B Pasteurella_multocida ielgvkhklvdkagawyayngekigqgKaNa-----mkwl
B Photobacterium_profundum idlgvkhklvekagawysykgnkigqgKaNs-----ckhl
B Photorhabdus_luminescens idlgvkhklvekagawysyngdkigqgKaNa-----tiyl
B Proteus_mirabilis idlgvkhklvekagawysyngekigqgKaNa-----tnyl
B Pseudomonas_cepacia idlgvqakivdkagawysyngekigqgKdNa-----refl
B Pseudomonas_pseudomallei idlgvqakivdkagawysysgekigqgKdNa-----refl
B Shewanella_amazonensis vdlgvlhklieksgawysykgdkigqgraNa-----tkfl
B Shewanella_putrefaciens vdlgvahkliekagawysykgdkigqgraNa-----gkyl
B Streptomyces_avermitilis idmgvengfvrkagawytyegdqlgqgKeNa-----rnfl
B Vibrio_alginolyticus vdlgvkhklvekagawysyngdkigqgKaNa-----cnyl
B Vibrio_angustum idlgvkhklvekagawysyqgdkigqgKaNs-----ckyl
B Vibrio_cholerae idlgvkhkmveksgawysyngdkigqgKaNa-----ckyl
B Vibrio_fischeri idlgvkhklvdkagawysyngdkigqgKaNa-----skfm
B Vibrio_parahaemolyticus idlgvkhklvekagawysyngdkigqgKaNa-----cnyl
B Vibrio_splendidus idlgvknklvekagawysykgdkigqgKsNs-----ckhl
B Vibrio_vulnificus idlgvkcklieksgawysyngdkigqgKaNa-----ckyl
B Yersinia_enterocolitica vdlgvkhkliekagawysyngdkigqgKaNa-----snyl
B Cupriavidus_metallidurans-Q1LR74 idlgvdakivekagawysyngekigqgKdNa-----reyl
B Cupriavidus_metallidurans-RECA idlgvdakivekagawysyngekigqgKdNa-----reyl
B Erwinia_carotovora-RECA idlgvkhklvekagawysyngekigqgKaNa-----ttyl
B Erwinia_carotovora-RECA_ERWCT vdlgvkhkliekagawysyngdkigqgKaNa-----cnfl
B Listeria_monocytogenes-RECA vdmaaevdvinksgswysykeerigqgreNa-----kqyl
B Listeria_monocytogenes-RECA_LISMF vdmaaevdvinksgswysykeerigqgreNa-----kqyl
B Neisseria_gonorrhoeae-RECA idigvkndiinksgawysyngakigqgKdNv-----rvwl
B Neisseria_gonorrhoeae-RECA_VAR idigvkndiinksgawysyngakigqgKdNv-----rvwl
B Salmonella_typhi-RECA vdlgvkekliekagawysyngekigqgKaNa-----ttwl
B Salmonella_typhi-RECA_SALPA vdlgvkekliekagawysyngekigqgKaNa-----ttwl
B Streptomyces_coelicolor-RECA idmgvengfvrkagawytyegdqlgqgKeNa-----rnfl
B Streptomyces_coelicolor-RECA_STRL idmgvengfvrkagawytyegdqlgqgKeNa-----rnfl
B Xylella_fastidiosa-RECA iemgveaklvekagawysyggerigqgKdNa-----rgyl
B Xylella_fastidiosa-RECA_XYLFT iemgveaklvekagawysyggerigqgKdNa-----rgyl
B Yersinia_pestis-RECA vdlgvkhkliekagawysyngdkigqgKaNa-----snyl
B Yersinia_pestis-RECA_YERPS vdlgvkhkliekagawysyngdkigqgKaNa-----snyl
B Mycobacterium_tuberculosis-RECA idmgvdqglirksgawftyegeqlgqgKeNa-----rnfl
B Mycobacterium_tuberculosis-RECA_M idmgvdqgfirksgswftyegeqlgqgKeNa-----rtfl
B Neisseria_meningitidis-RECA idigvkndiinksgawysyngakigqgKdNv-----rvwl
B Neisseria_meningitidis-RECA_NEIMA idigvkndiinksgawysyngakigqgKdNv-----rvwl
B Neisseria_meningitidis-RECA_VAR idigvkndiinksgawysyngakigqgKdNv-----rvwl
B Xanthomonas_vasicola-RECA_XANAC idmgveaklvdkagawysygderigqgKdNa-----rtyl
B Xanthomonas_vasicola-RECA_XANCP idmgveaklvdkagawysygderigqgKdNa-----rgyl
B Xanthomonas_vasicola-YP_201580 idmgveaklvekagawysygderigqgKdNa-----rtyl
B Pseudomonas_aeruginosa-Q48F94 vdlavlhgfveksgawysyqgskigqgKaNs-----akfl
B Pseudomonas_aeruginosa-RECA idlgvqlglveksgawysyqgskigqgKaNa-----akyl
B Pseudomonas_aeruginosa-RECA_PSEF5 idlgvlhgfleksgawysyqgnkigqgKaNs-----akfl
B Pseudomonas_aeruginosa-RECA_PSEFL idlgvlhgfveksgawyayngskigqgKaNs-----akfl
B Pseudomonas_aeruginosa-RECA_PSEPK idlgvsqglveksgawyayqgnkigqgKaNa-----akyl
B Pseudomonas_aeruginosa-RECA_PSEPU idlgvsqglveksgawyayqgnkigqgKaNa-----akyl
B Pseudomonas_aeruginosa-RECA_PSESM vdlavlhgfveksgawysyqgskigqgKaNs-----akfl
============================================================================
B DEINOCOCCUS_RADIODURANS vglaadmdiikkagsfysygderigqgKekt-----iayi
B Deinococcus_geothermalis vtlaadmdiikkagsfysygeerigqgKeka-----iayi
B Thermus_aquaticus-RECA vnvavaagviekagswfsygehrlgqgKeka-----aeyl
B Thermus_aquaticus-RECA_THET2 vnvavaagviekagswfsygelrlgqgKeka-----aeal
B Thermus_aquaticus-RECA_THET8 vnvavaagviekagswfsygelrlgqgKeka-----aeal
B Thermus_aquaticus-RECA_THETH vnvavaagviekagswfsygelrlgqgKeka-----aeal
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxexnxxxxxxxxxx
650 660 670 680
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------------
A Archaeoglobus_fulgidus ----------------------------------------
A Pyrococcus_abyssi ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------------------------------
A Desulfurococcus_amylolyticus ----------------------------------------
A Sulfolobus_acidocaldarius ----------------------------------------
A Sulfolobus_tokodaii ----------------------------------------
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN ----------------------------------------
* S_CEREVISIAE ----------------------------------------
* Apis_mellifera ----------------------------------------
* Aspergillus_flavus ----------------------------------------
* Aspergillus_fumigatus ----------------------------------------
* Bovine ----------------------------------------
* C_elegans ----------------------------------------
* Candida_albicans ----------------------------------------
* Candida_glabrata ----------------------------------------
* Canis_lupus ----------------------------------------
* Chaetomium_globosum ----------------------------------------
* Coccidioides_immitis ----------------------------------------
* Coprinus_cinereus ----------------------------------------
* Cricetulus_griseus ----------------------------------------
* Cryptococcus_neoformans ----------------------------------------
* Danio_rerio ----------------------------------------
* Debaryomyces_hansenii ----------------------------------------
* D_melanogaster ----------------------------------------
* D_pseudoobscura ----------------------------------------
* Emericella_nidulans ----------------------------------------
* Encephalitozoon_cuniculi ----------------------------------------
* Eremothecium_gossypii ----------------------------------------
* Chicken ----------------------------------------
* Gibberella_zeae ----------------------------------------
* Kluyveromyces_lactis ----------------------------------------
* Mouse ----------------------------------------
* Neurospora_crassa ----------------------------------------
* Rabbit ----------------------------------------
* Pichia_angusta ----------------------------------------
* Rat ----------------------------------------
* Schizosaccharomyces_pombe ----------------------------------------
* Strongylocentrotus_purpuratus ----------------------------------------
* Tetraodon_nigroviridis ----------------------------------------
* Tribolium_castaneum ----------------------------------------
* Ustilago_maydis ----------------------------------------
* X_tropicalis ----------------------------------------
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ----------------------------------------
* X_laevis-RA51B ----------------------------------------
Cryptosporidium_hominis ----------------------------------------
Cryptosporidium_parvum ----------------------------------------
Dictyostelium_discoideum ----------------------------------------
Entamoeba_histolytica ----------------------------------------
Leishmania_donovani ----------------------------------------
Leishmania_tropica ----------------------------------------
Plasmodium_berghei ----------------------------------------
Plasmodium_falciparum ----------------------------------------
Tetrahymena_thermophila ----------------------------------------
Theileria_annulata ----------------------------------------
Theileria_parva ----------------------------------------
Trypanosoma_brucei ----------------------------------------
Trypanosoma_cruzi ----------------------------------------
P Arabidopsis_thaliana ----------------------------------------
P Oryza_sativa ----------------------------------------
P Maize-R51A1 ----------------------------------------
P Maize-R51A2 ----------------------------------------
============================================================================
B E_COLI kdnpetakeiekkvre-l--l--ls-n-------------
B MYCOBACTERIUM_SMEGMATIS lentdvaneiekkike-k--l--g----------------
B MYCOBACTERIUM_TUBERCULOSIS menddvaneiekkike-k--l--gi-g-------------
B Acinetobacter_calcoaceticus eenpqisteieavire-q--l--lt-k-------------
B Actinobacillus_pleuropneumoniae kenpeiaekieqdire-q--l--is-t-------------
B Actinobacillus_succinogenes adnpekaaeleskira-e--f--qe-n-------------
B Actinomyces_bovis lentdvrdeiekkike-k--l--g----------------
B Azotobacter_vinelandii ednpevaaaveksird-q--l--la-a-------------
B Bacillus_clausii kenpeitaeierlird-h--h--gl-d----------ge-
B Bacillus_halodurans kenpeaaeeiesrire-h--y--glng-------------
B Bacillus_licheniformis kenkdillmiqeqire-h--y--g----------------
B Bacillus_megaterium kentdirqeiagqvre-h--h--gl-d-------------
B Bacillus_subtilis kenkdimlmiqeqire-h--y--gl-d-------------
B Bordetella_pertussis kehkemaieienkvre-nqgi--vs-r-------------
B Burkholderia_fungorum renpdiareienrire-s--l-----g-------------
B Chromobacterium_violaceum kanpaiadeierkire-a--v--gv-k-------------
B Clostridium_acetobutylicum kenidirsevenkire-kydl--pi-q-------------
B Clostridium_thermocellum kenpeiakeietkire-n--y--nq-t-------------
B Colwellia_psychrerythraea dehpemakdvdtklrd-m--f--ls-k-------------
B Corynebacterium_efficiens ketpeladeieekifr-k--l--gv-g-kf----------
B Desulfotalea_psychrophila mdtpaicheieekvrs-a--y--g----------------
B Enterococcus_faecalis adhpemmaevsklvrd-a--y--g----------------
B Haemophilus_ducreyi kenpevaekieqeirn-l--l--il-t-------------
B Haemophilus_influenzae nenieksdelearlra-e--l--va-n-------------
B Histophilus_somni aehpeqaaileqklrs-e--l--la-n-------------
B Kineococcus_radiotolerans rdnpdlgdeiekrike-k--l--gi-g-------------
B Leifsonia_xyli ianpdiaaeienkiki-k--l--g----------------
B Mannheimia_succiniciproducens aenptvaaelenkira-e--l--la-n-------------
B Nitrosomonas_europaea kehksiaheieqkir-------------------------
B Nitrosomonas_eutropha kehkdlaheieqkir-----------a-------------
B Oceanobacillus_iheyensis keheevlteihqsirq-h--y--el-d-------------
B Pasteurella_multocida eehpeealaletklrn-e--l--la-n-------------
B Photobacterium_profundum venpaiaeeiekllrd-m--l--ls-p-------------
B Photorhabdus_luminescens kehpevateldkklre-m--l--lh-n-------------
B Proteus_mirabilis kehpemynelntklre-m--l--ln-h-------------
B Pseudomonas_cepacia renpeiareienrire-s--l-----g-------------
B Pseudomonas_pseudomallei renpeiareienrire-s--l-----g-------------
B Shewanella_amazonensis aenteiaaeiektlre-m--l--l----------------
B Shewanella_putrefaciens tenpaiaaeidktlrell--l--sn-p-------------
B Streptomyces_avermitilis kdnpdlaneiekkike-k--l--gv-gvrpeeptaepgad
B Vibrio_alginolyticus rehpevaktidtklre-m--l--la-p-------------
B Vibrio_angustum venpaiaaeietklrd-l--l--lt---------------
B Vibrio_cholerae kenpeiaktldkklre-m--l--ln-p-------------
B Vibrio_fischeri rentevaaeldkklre-m--l--lt-p-------------
B Vibrio_parahaemolyticus rehpeiaktidtklre-m--l--ls---------------
B Vibrio_splendidus renpeialeldtklre-l--l--l----------------
B Vibrio_vulnificus kenvdvakvldtklre-m--l--ls---------------
B Yersinia_enterocolitica kenpavaaeldkklre-m--l--ln-g-------------
B Cupriavidus_metallidurans-Q1LR74 renpdiadeienkvrl-a--l--gv-a-------------
B Cupriavidus_metallidurans-RECA renpdiadeienkvrl-a--l--gv-a-------------
B Erwinia_carotovora-RECA kehpemynelntklre-m--llnh----------------
B Erwinia_carotovora-RECA_ERWCT kenptisaeldkklre-m--llhk----------------
B Listeria_monocytogenes-RECA kehtdirdeiskrvre-e--y--e----------------
B Listeria_monocytogenes-RECA_LISMF kehtdirdeiskrvre-e--y--e----------------
B Neisseria_gonorrhoeae-RECA kenpeisdeidakira-l--n--gv-e-------------
B Neisseria_gonorrhoeae-RECA_VAR kenpeisdeidakira-l--n--gv-e-------------
B Salmonella_typhi-RECA kenpatakeiekrvre-l--l--ls-n-------------
B Salmonella_typhi-RECA_SALPA kenpatakeiekrvre-l--l--ls-n-------------
B Streptomyces_coelicolor-RECA kdnpdlaneiekkikq-k--l--gv-g-------------
B Streptomyces_coelicolor-RECA_STRL kdnpdlaneiekkikq-k--l--gv-g-------------
B Xylella_fastidiosa-RECA renphlaakleadlre-k--f--ep-t-------------
B Xylella_fastidiosa-RECA_XYLFT renphfaakleadlre-k--f--ep-t-------------
B Yersinia_pestis-RECA kenpaiaaeldkklre-m--l--ln-g-------------
B Yersinia_pestis-RECA_YERPS kenpaiaaeldkklre-m--l--ln-g-------------
B Mycobacterium_tuberculosis-RECA venadvadeiekkike-k--l--gi-g-------------
B Mycobacterium_tuberculosis-RECA_M mendevaneiekkike-k--l--gi-g-------------
B Neisseria_meningitidis-RECA kenpevaneidakira-l--n--gv-e-------------
B Neisseria_meningitidis-RECA_NEIMA kenpevadeidakira-l--n--gv-e-------------
B Neisseria_meningitidis-RECA_VAR kenpevaneidakira-l--n--gv-e-------------
B Xanthomonas_vasicola-RECA_XANAC rdnsqvatrleaelre-k--f--q----------------
B Xanthomonas_vasicola-RECA_XANCP rdnpqvaikleaelre-k--f--q----------------
B Xanthomonas_vasicola-YP_201580 rdnpqvavrleaelre-k--f--q----------------
B Pseudomonas_aeruginosa-Q48F94 adnpeickalekqird-k--l--lt-p-------------
B Pseudomonas_aeruginosa-RECA ednpeigsvlektird-q--l--l----------------
B Pseudomonas_aeruginosa-RECA_PSEF5 qdnpeignalekqire-k--l--l----------------
B Pseudomonas_aeruginosa-RECA_PSEFL adnpdivatlekqird-k--l--l----------------
B Pseudomonas_aeruginosa-RECA_PSEPK aenpaigaeiekqire-k--l--l----------------
B Pseudomonas_aeruginosa-RECA_PSEPU aenpaigaeiekqird-k--l--l----------------
B Pseudomonas_aeruginosa-RECA_PSESM adnpeickalekqird-k--l--l----------------
============================================================================
B DEINOCOCCUS_RADIODURANS aerpemeqeirdrvma-a--i--ra-g-------------
B Deinococcus_geothermalis aerpeleqeirdrvla-a--i--k----------------
B Thermus_aquaticus-RECA rerpelleeirakvl-------------------------
B Thermus_aquaticus-RECA_THET2 rerpelleeirtkvl-------------------------
B Thermus_aquaticus-RECA_THET8 rerpelleeirakvl-------------------------
B Thermus_aquaticus-RECA_THETH rerpelleeirakvl-------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
690 700 710 720
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------------
A Archaeoglobus_fulgidus ----------------------------------------
A Pyrococcus_abyssi ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------------------------------
A Desulfurococcus_amylolyticus ----------------------------------------
A Sulfolobus_acidocaldarius ----------------------------------------
A Sulfolobus_tokodaii ----------------------------------------
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN ----------------------------------------
* S_CEREVISIAE ----------------------------------------
* Apis_mellifera ----------------------------------------
* Aspergillus_flavus ----------------------------------------
* Aspergillus_fumigatus ----------------------------------------
* Bovine ----------------------------------------
* C_elegans ----------------------------------------
* Candida_albicans ----------------------------------------
* Candida_glabrata ----------------------------------------
* Canis_lupus ----------------------------------------
* Chaetomium_globosum ----------------------------------------
* Coccidioides_immitis ----------------------------------------
* Coprinus_cinereus ----------------------------------------
* Cricetulus_griseus ----------------------------------------
* Cryptococcus_neoformans ----------------------------------------
* Danio_rerio ----------------------------------------
* Debaryomyces_hansenii ----------------------------------------
* D_melanogaster ----------------------------------------
* D_pseudoobscura ----------------------------------------
* Emericella_nidulans ----------------------------------------
* Encephalitozoon_cuniculi ----------------------------------------
* Eremothecium_gossypii ----------------------------------------
* Chicken ----------------------------------------
* Gibberella_zeae ----------------------------------------
* Kluyveromyces_lactis ----------------------------------------
* Mouse ----------------------------------------
* Neurospora_crassa ----------------------------------------
* Rabbit ----------------------------------------
* Pichia_angusta ----------------------------------------
* Rat ----------------------------------------
* Schizosaccharomyces_pombe ----------------------------------------
* Strongylocentrotus_purpuratus ----------------------------------------
* Tetraodon_nigroviridis ----------------------------------------
* Tribolium_castaneum ----------------------------------------
* Ustilago_maydis ----------------------------------------
* X_tropicalis ----------------------------------------
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ----------------------------------------
* X_laevis-RA51B ----------------------------------------
Cryptosporidium_hominis ----------------------------------------
Cryptosporidium_parvum ----------------------------------------
Dictyostelium_discoideum ----------------------------------------
Entamoeba_histolytica ----------------------------------------
Leishmania_donovani ----------------------------------------
Leishmania_tropica ----------------------------------------
Plasmodium_berghei ----------------------------------------
Plasmodium_falciparum ----------------------------------------
Tetrahymena_thermophila ----------------------------------------
Theileria_annulata ----------------------------------------
Theileria_parva ----------------------------------------
Trypanosoma_brucei ----------------------------------------
Trypanosoma_cruzi ----------------------------------------
P Arabidopsis_thaliana ----------------------------------------
P Oryza_sativa ----------------------------------------
P Maize-R51A1 ----------------------------------------
P Maize-R51A2 ----------------------------------------
============================================================================
B E_COLI ------p---n--s---t---p----dfsv---d---d--
B MYCOBACTERIUM_SMEGMATIS -----------------i---g----avvt---a---e--
B MYCOBACTERIUM_TUBERCULOSIS ------a---v--v---t---d----dxs----d---d--
B Acinetobacter_calcoaceticus ------a---s--d---q---t----a-ah---d---e--
B Actinobacillus_pleuropneumoniae ------p---e--k---t---sag--eqnv---l---d--
B Actinobacillus_succinogenes ------p---e--k---t---l----iael---d---g--
B Actinomyces_bovis -----------------i---g----adlt---a---e--
B Azotobacter_vinelandii ------p---a--s---a---r----paal---a---d--
B Bacillus_clausii ------a---k--l---e---e----aae----e---q--
B Bacillus_halodurans ------e---i--e---v---e----aps----e---e--
B Bacillus_licheniformis -----------------l-dtg----gaap---a---q--
B Bacillus_megaterium ------q---d--g---e---p----ape----d---d--
B Bacillus_subtilis ------n---n--g---v---v----qqqa---e---e--
B Bordetella_pertussis ------a---a--t---f---p----asea---e---d--
B Burkholderia_fungorum ------v---n--a---m---a----eaat---v---a--
B Chromobacterium_violaceum ------i---e--i---n---e----nqg----d---e--
B Clostridium_acetobutylicum ------k---v--k---n---e----kpk----i---e--
B Clostridium_thermocellum ------f---l--m---s---i----naqv---d---t--
B Colwellia_psychrerythraea --------------------------tvva---e---d--
B Corynebacterium_efficiens ------a---q--t---a---d----elt----d---d--
B Desulfotalea_psychrophila -----------------l---p----dree---t---k--
B Enterococcus_faecalis -----------------igedg----stit---e---e--
B Haemophilus_ducreyi ------p---d--q---p---asekleldv---n---d--
B Haemophilus_influenzae ------p---e--q---a---l----madi---e---q--
B Histophilus_somni ------p---e--k---a-lla----dlea---e---s--
B Kineococcus_radiotolerans ------a---r--l---d---a----paev---d---v--
B Leifsonia_xyli -----------------i---v----adpn---a---d--
B Mannheimia_succiniciproducens ------p---e--q---a----------ll---a---d--
B Nitrosomonas_europaea -------------a---a---v----glae---t---d--
B Nitrosomonas_eutropha ------a---v--d---l---a----etn----n---r--
B Oceanobacillus_iheyensis ------k------v---d---e----dkt----e---e--
B Pasteurella_multocida ------p---e--k---v---l----aadi--ae---k--
B Photobacterium_profundum ------a---v--e---e---v----eetd---a---k--
B Photorhabdus_luminescens ------a---gefn---s---a----asdy---e---d--
B Proteus_mirabilis ------ageft--s---a---a----dfag---e---e--
B Pseudomonas_cepacia ------v---v--a---m---p----dgag---n---e--
B Pseudomonas_pseudomallei ------v---a--a---m---p----qgag---s---e--
B Shewanella_amazonensis -----------------s---h----ssss---g---s--
B Shewanella_putrefaciens ------s---a--l---a---s----sas----d---d--
B Streptomyces_avermitilis aavtsaa---a--a---t---d----dta----k---t--
B Vibrio_alginolyticus ------a---l--a--------------ea---p---e--
B Vibrio_angustum ------p---v--t---e---g----d-qv---d---e--
B Vibrio_cholerae ------e---n--mqlia---e----tssa---a---d--
B Vibrio_fischeri ------a---e--e---k---p----e------t---d--
B Vibrio_parahaemolyticus ------p------a---q---p----eapa---a---g--
B Vibrio_splendidus -----------------t---p----avle---e---k--
B Vibrio_vulnificus ------p---a--n---i---n----desa---e---l--
B Yersinia_enterocolitica ------g---n--g---e---q----pvvt---a---t--
B Cupriavidus_metallidurans-Q1LR74 ------p---l--n---t---v----agap---a---e--
B Cupriavidus_metallidurans-RECA ------p---l--n---t---v----agap---a---e--
B Erwinia_carotovora-RECA -----------------a---g----efts---a---a--
B Erwinia_carotovora-RECA_ERWCT -----------------g---n----elkp---a---a--
B Listeria_monocytogenes-RECA -----------------i---d----gsskepld---e--
B Listeria_monocytogenes-RECA_LISMF -----------------i---d----gsnkepld---e--
B Neisseria_gonorrhoeae-RECA ------m---h--i---t--------egtq---d---e--
B Neisseria_gonorrhoeae-RECA_VAR ------m---h--i---t--------egtq---d---e--
B Salmonella_typhi-RECA ------q---n--a---t---p----dfav---d---d--
B Salmonella_typhi-RECA_SALPA ------q---n--a---t---p----dfav---d---d--
B Streptomyces_coelicolor-RECA ------v---h--p---e---e----sat----epgad--
B Streptomyces_coelicolor-RECA_STRL ------v---h--p---e---e----sat----epgad--
B Xylella_fastidiosa-RECA ------e---l--s---r---e----egde---d---t--
B Xylella_fastidiosa-RECA_XYLFT ------e---l--s---r---e----egde---d---t--
B Yersinia_pestis-RECA ------g---n--g---e---q----pvaa---a---t--
B Yersinia_pestis-RECA_YERPS ------g---n--g---e---q----pvaa---a---t--
B Mycobacterium_tuberculosis-RECA ------a---v--v---t---d----dps----n---d--
B Mycobacterium_tuberculosis-RECA_M ------a---v--v---t---d----dls----d---d--
B Neisseria_meningitidis-RECA ------m---h--i---t--------egtq---d---e--
B Neisseria_meningitidis-RECA_NEIMA ------m---h--i---t--------egtq---d---e--
B Neisseria_meningitidis-RECA_VAR ------m---h--i---t--------egtq---d---e--
B Xanthomonas_vasicola-RECA_XANAC -----------------p---a----eapr---e---a--
B Xanthomonas_vasicola-RECA_XANCP -----------------p---a----eapr---e---a--
B Xanthomonas_vasicola-YP_201580 -----------------p---a----eapr---e---a--
B Pseudomonas_aeruginosa-Q48F94 ------g---v--d---t---k----avgs---r---eaa
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS ------nageap---------------ala---p---a--
B Deinococcus_geothermalis -------egrdp----------------ia---a---v--
B Thermus_aquaticus-RECA ------eradkv---------------vla----------
B Thermus_aquaticus-RECA_THET2 ------eragev---------------vla----------
B Thermus_aquaticus-RECA_THET8 ------ersdqv---------------vla----------
B Thermus_aquaticus-RECA_THETH ------ersdqv---------------vla----------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
730 740 750 760
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS ----------------------------------------
A Archaeoglobus_fulgidus ----------------------------------------
A Pyrococcus_abyssi ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE ----------------------------------------
A Methanococcus_jannaschii ----------------------------------------
A Methanococcus_maripaludis ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS ----------------------------------------
A Desulfurococcus_amylolyticus ----------------------------------------
A Sulfolobus_acidocaldarius ----------------------------------------
A Sulfolobus_tokodaii ----------------------------------------
A Aeropyrum_pernix-RADA ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2 ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6 ----------------------------------------
============================================================================
* HUMAN ----------------------------------------
* S_CEREVISIAE ----------------------------------------
* Apis_mellifera ----------------------------------------
* Aspergillus_flavus ----------------------------------------
* Aspergillus_fumigatus ----------------------------------------
* Bovine ----------------------------------------
* C_elegans ----------------------------------------
* Candida_albicans ----------------------------------------
* Candida_glabrata ----------------------------------------
* Canis_lupus ----------------------------------------
* Chaetomium_globosum ----------------------------------------
* Coccidioides_immitis ----------------------------------------
* Coprinus_cinereus ----------------------------------------
* Cricetulus_griseus ----------------------------------------
* Cryptococcus_neoformans ----------------------------------------
* Danio_rerio ----------------------------------------
* Debaryomyces_hansenii ----------------------------------------
* D_melanogaster ----------------------------------------
* D_pseudoobscura ----------------------------------------
* Emericella_nidulans ----------------------------------------
* Encephalitozoon_cuniculi ----------------------------------------
* Eremothecium_gossypii ----------------------------------------
* Chicken ----------------------------------------
* Gibberella_zeae ----------------------------------------
* Kluyveromyces_lactis ----------------------------------------
* Mouse ----------------------------------------
* Neurospora_crassa ----------------------------------------
* Rabbit ----------------------------------------
* Pichia_angusta ----------------------------------------
* Rat ----------------------------------------
* Schizosaccharomyces_pombe ----------------------------------------
* Strongylocentrotus_purpuratus ----------------------------------------
* Tetraodon_nigroviridis ----------------------------------------
* Tribolium_castaneum ----------------------------------------
* Ustilago_maydis ----------------------------------------
* X_tropicalis ----------------------------------------
* Yarrowia_lipolytica ----------------------------------------
* X_laevis-RA51A ----------------------------------------
* X_laevis-RA51B ----------------------------------------
Cryptosporidium_hominis ----------------------------------------
Cryptosporidium_parvum ----------------------------------------
Dictyostelium_discoideum ----------------------------------------
Entamoeba_histolytica ----------------------------------------
Leishmania_donovani ----------------------------------------
Leishmania_tropica ----------------------------------------
Plasmodium_berghei ----------------------------------------
Plasmodium_falciparum ----------------------------------------
Tetrahymena_thermophila ----------------------------------------
Theileria_annulata ----------------------------------------
Theileria_parva ----------------------------------------
Trypanosoma_brucei ----------------------------------------
Trypanosoma_cruzi ----------------------------------------
P Arabidopsis_thaliana ----------------------------------------
P Oryza_sativa ----------------------------------------
P Maize-R51A1 ----------------------------------------
P Maize-R51A2 ----------------------------------------
============================================================================
B E_COLI -s---------e---gv-----a--e-tn-e-----df--
B MYCOBACTERIUM_SMEGMATIS -a---------d---dv-----l--p-ap-v-----df--
B MYCOBACTERIUM_TUBERCULOSIS ---------------gv-----l--p-ap-v-----df--
B Acinetobacter_calcoaceticus -t---------e---ee-----p--d-ll-e-----s---
B Actinobacillus_pleuropneumoniae -a---------d---dv-----n--dfed-e-----af-n
B Actinobacillus_succinogenes -s---------g---kn-----t--e-ld-dsedtvnf--
B Actinomyces_bovis ---------------da-----a--e-vp-a-----df--
B Azotobacter_vinelandii -e---------p----------a--d-ad-l-----dy--
B Bacillus_clausii ---------------af-----e--d-vp-l-----dl--
B Bacillus_halodurans ---------------ef-----e--d-lp-l-----dl--
B Bacillus_licheniformis -e---------d---ea-----q--aqee-l-----ef--
B Bacillus_megaterium ---------------d---------q-gd-l-----ni--
B Bacillus_subtilis -t---------q---ee-----l--e-fe-e---------
B Bordetella_pertussis -g---------e----------------------------
B Burkholderia_fungorum -s---------a---ev-----a--d-ee-e---------
B Chromobacterium_violaceum ---------------ef-----a--d-da-f-----da--
B Clostridium_acetobutylicum ---------------kg-----t--e-nn-t-----k---
B Clostridium_thermocellum -d---------d---ev-----d--l-ed-e-----e---
B Colwellia_psychrerythraea -k---------s---ev-----k--e-ke-k-----a---
B Corynebacterium_efficiens ---------------pv-----e--l-ipnv-----dfdd
B Desulfotalea_psychrophila -r---------e---et---aqi--p-dt-e-----kt--
B Enterococcus_faecalis -a---------e---gq-----e--e-lp-l-----de--
B Haemophilus_ducreyi -e---------s---df-----d--e-af-e-----eq--
B Haemophilus_influenzae -s---------e---nn-----t--e-se-s-----df--
B Histophilus_somni -e---------s---ni-----s--e-ve-s-----df--
B Kineococcus_radiotolerans -e---------e---kv-------------------df--
B Leifsonia_xyli -aeptaaagsle---ek-----l--p-ar-k-----ga--
B Mannheimia_succiniciproducens -i---------e---tn-----s--e-ek-e-----df--
B Nitrosomonas_europaea -s---------r---vv-----p--p-ss-g-----e---
B Nitrosomonas_eutropha ---------------tv-----p--p-sp-s-----e---
B Oceanobacillus_iheyensis ---------------ea-----s--q-es-l-----dl--
B Pasteurella_multocida -n---------e---ss-----t--g-le-a-----dy--
B Photobacterium_profundum -k---------s---gsk----k--d-ea-e-----al--
B Photorhabdus_luminescens -n---------e---ne-----e--m-nn-e-----ef--
B Proteus_mirabilis -s---------d---sd-----a--d-dt-k-----e---
B Pseudomonas_cepacia -a---------e---am-----d--e-ee-----------
B Pseudomonas_pseudomallei -a---------e---im-----d--e-ee-----------
B Shewanella_amazonensis -a---------d---ev-----e-gd-en-i-----df-e
B Shewanella_putrefaciens ---------------dn-----v--e-gn-i-----dl-e
B Streptomyces_avermitilis ---------------vs-----a--p-aa-k-----tt--
B Vibrio_alginolyticus -a---------g---ea-----p--e-qa-e-----ef--
B Vibrio_angustum -k---------n---sd-----i--e-ed-e-----af--
B Vibrio_cholerae -d---------v---ef-----g--a-vp-e-----ef--
B Vibrio_fischeri -a---------a---pe-----i--e-en-e-----ef--
B Vibrio_parahaemolyticus -e---------k----------p--e-qe-e-----ef--
B Vibrio_splendidus -g---------a---ek-----e--e-en-e-----el--
B Vibrio_vulnificus -v---------e---em-----p--e--q-e-----ef--
B Yersinia_enterocolitica va---------d---et-----d--e-ts-e-----ef--
B Cupriavidus_metallidurans-Q1LR74 -v---------e---g------------------------
B Cupriavidus_metallidurans-RECA -v---------e---g------------------------
B Erwinia_carotovora-RECA -a---------g---nshderdfcge-gk-e-----ef--
B Erwinia_carotovora-RECA_ERWCT -a---------g---nshdedelage-gk-e-----ef--
B Listeria_monocytogenes-RECA -k---------e---et-----l--s-ll-d-----de--
B Listeria_monocytogenes-RECA_LISMF -g---------e---et-----l--s-ll-d-----de--
B Neisseria_gonorrhoeae-RECA -t---------d---g---------e-rp-e-----e---
B Neisseria_gonorrhoeae-RECA_VAR -t---------d---g---------e-rp-e-----e---
B Salmonella_typhi-RECA -s---------e---gv-----a--e-tn-e-----df--
B Salmonella_typhi-RECA_SALPA -s---------e---gv-----a--e-tn-e-----df--
B Streptomyces_coelicolor-RECA ---------------aa-----s--a-ap-a-----da--
B Streptomyces_coelicolor-RECA_STRL ---------------aa-----s--a-ap-a-----da--
B Xylella_fastidiosa-RECA -l---------e---dt-----m-----------------
B Xylella_fastidiosa-RECA_XYLFT -l---------e---da-----m-----------------
B Yersinia_pestis-RECA -a---------efadga-----d--e-tn-e-----ef--
B Yersinia_pestis-RECA_YERPS -a---------efadgv-----d--e-tn-e-----ef--
B Mycobacterium_tuberculosis-RECA ---------------gv-----l--p-ap-v-----df--
B Mycobacterium_tuberculosis-RECA_M ---------------gv-----l--p-ap-v-----df--
B Neisseria_meningitidis-RECA -t---------d---g---------e-rp-e-----e---
B Neisseria_meningitidis-RECA_NEIMA -t---------d---g---------e-rp-e-----e---
B Neisseria_meningitidis-RECA_VAR -t---------d---g---------e-rp-e-----e---
B Xanthomonas_vasicola-RECA_XANAC -g---------d---de-----d--k-e------------
B Xanthomonas_vasicola-RECA_XANCP -g---------e---te-----s--e-e------------
B Xanthomonas_vasicola-YP_201580 -g---------d---de-----e--k-e------------
B Pseudomonas_aeruginosa-Q48F94 va---------d---dm-----a--e-ad-a-----di--
B Pseudomonas_aeruginosa-RECA ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS -paapeaae---------------------a---------
B Deinococcus_geothermalis -petpalae-------------------------------
B Thermus_aquaticus-RECA --ageeege-------------------------------
B Thermus_aquaticus-RECA_THET2 --agedege-------------------------------
B Thermus_aquaticus-RECA_THET8 --agedege-------------------------------
B Thermus_aquaticus-RECA_THETH --agedege-------------------------------
============================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
770 780 790 800
----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxx
===========================================================
A PYROCOCCUS_FURIOSUS -----------------------
A Archaeoglobus_fulgidus -----------------------
A Pyrococcus_abyssi -----------------------
===========================================================
A METHANOCOCCUS_VOLTAE -----------------------
A Methanococcus_jannaschii -----------------------
A Methanococcus_maripaludis -----------------------
===========================================================
A SULFOLOBUS_SOLFATARICUS -----------------------
A Desulfurococcus_amylolyticus -----------------------
A Sulfolobus_acidocaldarius -----------------------
A Sulfolobus_tokodaii -----------------------
A Aeropyrum_pernix-RADA -----------------------
A Aeropyrum_pernix-RADA_VAR_OH1 -----------------------
A Aeropyrum_pernix-RADA_VAR_OH2 -----------------------
A Aeropyrum_pernix-RADA_VAR_OH3 -----------------------
A Aeropyrum_pernix-RADA_VAR_TB1 -----------------------
A Aeropyrum_pernix-RADA_VAR_TB2 -----------------------
A Aeropyrum_pernix-RADA_VAR_TB6 -----------------------
===========================================================
* HUMAN -----------------------
* S_CEREVISIAE -----------------------
* Apis_mellifera -----------------------
* Aspergillus_flavus -----------------------
* Aspergillus_fumigatus -----------------------
* Bovine -----------------------
* C_elegans -----------------------
* Candida_albicans -----------------------
* Candida_glabrata -----------------------
* Canis_lupus -----------------------
* Chaetomium_globosum -----------------------
* Coccidioides_immitis -----------------------
* Coprinus_cinereus -----------------------
* Cricetulus_griseus -----------------------
* Cryptococcus_neoformans -----------------------
* Danio_rerio -----------------------
* Debaryomyces_hansenii -----------------------
* D_melanogaster -----------------------
* D_pseudoobscura -----------------------
* Emericella_nidulans -----------------------
* Encephalitozoon_cuniculi -----------------------
* Eremothecium_gossypii -----------------------
* Chicken -----------------------
* Gibberella_zeae -----------------------
* Kluyveromyces_lactis -----------------------
* Mouse -----------------------
* Neurospora_crassa -----------------------
* Rabbit -----------------------
* Pichia_angusta -----------------------
* Rat -----------------------
* Schizosaccharomyces_pombe -----------------------
* Strongylocentrotus_purpuratus -----------------------
* Tetraodon_nigroviridis -----------------------
* Tribolium_castaneum -----------------------
* Ustilago_maydis -----------------------
* X_tropicalis -----------------------
* Yarrowia_lipolytica -----------------------
* X_laevis-RA51A -----------------------
* X_laevis-RA51B -----------------------
Cryptosporidium_hominis -----------------------
Cryptosporidium_parvum -----------------------
Dictyostelium_discoideum -----------------------
Entamoeba_histolytica -----------------------
Leishmania_donovani -----------------------
Leishmania_tropica -----------------------
Plasmodium_berghei -----------------------
Plasmodium_falciparum -----------------------
Tetrahymena_thermophila -----------------------
Theileria_annulata -----------------------
Theileria_parva -----------------------
Trypanosoma_brucei -----------------------
Trypanosoma_cruzi -----------------------
P Arabidopsis_thaliana -----------------------
P Oryza_sativa -----------------------
P Maize-R51A1 -----------------------
P Maize-R51A2 -----------------------
===========================================================
B E_COLI -----------------------
B MYCOBACTERIUM_SMEGMATIS -----------------------
B MYCOBACTERIUM_TUBERCULOSIS -----------------------
B Acinetobacter_calcoaceticus -----------------------
B Actinobacillus_pleuropneumoniae eeel-------------------
B Actinobacillus_succinogenes --e--------------------
B Actinomyces_bovis -----------------------
B Azotobacter_vinelandii -----------------------
B Bacillus_clausii k----------------------
B Bacillus_halodurans k----------------------
B Bacillus_licheniformis -----------------------
B Bacillus_megaterium -----------------------
B Bacillus_subtilis -----------------------
B Bordetella_pertussis -----------------------
B Burkholderia_fungorum -----------------------
B Chromobacterium_violaceum -----------------------
B Clostridium_acetobutylicum -----------------------
B Clostridium_thermocellum -----------------------
B Colwellia_psychrerythraea -----------------------
B Corynebacterium_efficiens edddfdastapagtftevtten-
B Desulfotalea_psychrophila -kdv-------------------
B Enterococcus_faecalis -----------------------
B Haemophilus_ducreyi --e--------------------
B Haemophilus_influenzae --e--------------------
B Histophilus_somni -----------------------
B Kineococcus_radiotolerans -----------------------
B Leifsonia_xyli -----------------------
B Mannheimia_succiniciproducens --e--------------------
B Nitrosomonas_europaea -----------------------
B Nitrosomonas_eutropha -----------------------
B Oceanobacillus_iheyensis k----------------------
B Pasteurella_multocida -----------------------
B Photobacterium_profundum --k--------------------
B Photorhabdus_luminescens -----------------------
B Proteus_mirabilis -----------------------
B Pseudomonas_cepacia -----------------------
B Pseudomonas_pseudomallei -----------------------
B Shewanella_amazonensis tgevf------------------
B Shewanella_putrefaciens tgevf------------------
B Streptomyces_avermitilis -----kskaaaaks---------
B Vibrio_alginolyticus -----------------------
B Vibrio_angustum -----------------------
B Vibrio_cholerae -----------------------
B Vibrio_fischeri -----------------------
B Vibrio_parahaemolyticus -----------------------
B Vibrio_splendidus -----------------------
B Vibrio_vulnificus -----------------------
B Yersinia_enterocolitica -----------------------
B Cupriavidus_metallidurans-Q1LR74 -----------------------
B Cupriavidus_metallidurans-RECA -----------------------
B Erwinia_carotovora-RECA -----------------------
B Erwinia_carotovora-RECA_ERWCT -----------------------
B Listeria_monocytogenes-RECA -----------------------
B Listeria_monocytogenes-RECA_LISMF -----------------------
B Neisseria_gonorrhoeae-RECA -----------------------
B Neisseria_gonorrhoeae-RECA_VAR -----------------------
B Salmonella_typhi-RECA -----------------------
B Salmonella_typhi-RECA_SALPA -----------------------
B Streptomyces_coelicolor-RECA -apavpapttakatkskataaks
B Streptomyces_coelicolor-RECA_STRL -apavpapttakatkskaaaaks
B Xylella_fastidiosa-RECA -----------------------
B Xylella_fastidiosa-RECA_XYLFT -----------------------
B Yersinia_pestis-RECA -----------------------
B Yersinia_pestis-RECA_YERPS -----------------------
B Mycobacterium_tuberculosis-RECA -----------------------
B Mycobacterium_tuberculosis-RECA_M -----------------------
B Neisseria_meningitidis-RECA -----------------------
B Neisseria_meningitidis-RECA_NEIMA -----------------------
B Neisseria_meningitidis-RECA_VAR -----------------------
B Xanthomonas_vasicola-RECA_XANAC -----------------------
B Xanthomonas_vasicola-RECA_XANCP -----------------------
B Xanthomonas_vasicola-YP_201580 -----------------------
B Pseudomonas_aeruginosa-Q48F94 -----------------------
B Pseudomonas_aeruginosa-RECA -----------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 -----------------------
B Pseudomonas_aeruginosa-RECA_PSEFL -----------------------
B Pseudomonas_aeruginosa-RECA_PSEPK -----------------------
B Pseudomonas_aeruginosa-RECA_PSEPU -----------------------
B Pseudomonas_aeruginosa-RECA_PSESM -----------------------
===========================================================
B DEINOCOCCUS_RADIODURANS -----------------------
B Deinococcus_geothermalis -----------------------
B Thermus_aquaticus-RECA -----------------------
B Thermus_aquaticus-RECA_THET2 -----------------------
B Thermus_aquaticus-RECA_THET8 -----------------------
B Thermus_aquaticus-RECA_THETH -----------------------
===========================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxx
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