Rad51/RadA/RecA

10 20 30 40 ----:----|----:----|----:----|----:----| Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ============================================================================ A PYROCOCCUS_FURIOSUS ----------------------------------age--- A Archaeoglobus_fulgidus ---------------------------------------- A Pyrococcus_abyssi ------------------------mimgkks---sdp--- ============================================================================ A METHANOCOCCUS_VOLTAE -------------------------------sdn------ A Methanococcus_jannaschii itfiyffgniiyylpiysyinnykfmlmviimdd------ A Methanococcus_maripaludis -------------------------------adv------ ============================================================================ A SULFOLOBUS_SOLFATARICUS ----------------------------------sne--- A Desulfurococcus_amylolyticus ----------------------------------seeket A Sulfolobus_acidocaldarius ---------------------------------------- A Sulfolobus_tokodaii ----------------------------------ndm--- A Aeropyrum_pernix-RADA ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_OH1 ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_OH2 ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_OH3 ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_TB1 ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_TB2 ---------------------------------------- A Aeropyrum_pernix-RADA_VAR_TB6 ---------------------------------------- ============================================================================ * HUMAN ---------------------------------------- * S_CEREVISIAE ----------------------------------sqv--- * Apis_mellifera ---------------------------------------- * Aspergillus_flavus ---------------------------------------- * Aspergillus_fumigatus ---------------------------------------- * Bovine ---------------------------------------- * C_elegans -------------saqasrqkk--sdqeqra--------- * Candida_albicans ----------------------tqteie-qv---dlh-ee * Candida_glabrata ----------------------------------tev--- * Canis_lupus ---------------------------------------- * Chaetomium_globosum ---------------------------------------- * Coccidioides_immitis ---------------------------------------- * Coprinus_cinereus ---------------------------------------- * Cricetulus_griseus ---------------------------------------- * Cryptococcus_neoformans ---------------------------------------- * Danio_rerio ---------------------------------------- * Debaryomyces_hansenii -------------tet------------------------ * D_melanogaster ---------------------------------------- * D_pseudoobscura ---------------------------------------- * Emericella_nidulans ---------------------------------------- * Encephalitozoon_cuniculi ---------------------------------------- * Eremothecium_gossypii -sqvqehiiqdphssqynihatgaserqgss---eht-dg * Chicken ---------------------------------------- * Gibberella_zeae ---------------------------------------- * Kluyveromyces_lactis ---------------------------------------- * Mouse ---------------------------------------- * Neurospora_crassa ----------------sn---------------------- * Rabbit ---------------------------------------- * Pichia_angusta ---------------tqvaevnhitsneqqg---s----- * Rat ---------------------------------------- * Schizosaccharomyces_pombe --------------adtev-emqvsaadtnn---nen-gq * Strongylocentrotus_purpuratus ---------------------------------------- * Tetraodon_nigroviridis ---------------------------------------- * Tribolium_castaneum ---------------------------------------- * Ustilago_maydis ---------------------------------------- * X_tropicalis ---------------------------------------- * Yarrowia_lipolytica ---------------------------------------- * X_laevis-RA51A ---------------------------------------- * X_laevis-RA51B ---------------------------------------- Cryptosporidium_hominis --------------stin---------------------- Cryptosporidium_parvum --------------stin---------------------- Dictyostelium_discoideum -------------asrqrqe-------------------- Entamoeba_histolytica ---------sakqiqrgseeelleseenlke---ke---- Leishmania_donovani qtrskakgrrgrpsarpsdevevvesqpqea---lqn-ee Leishmania_tropica qtrskakgrrgrpsarpseevevvesqpqev---lqn-ee Plasmodium_berghei -------------------------pamksa---n----- Plasmodium_falciparum ---------------------------------------- Tetrahymena_thermophila ---------------------------------------- Theileria_annulata -------------------------ssd------------ Theileria_parva -------------------------ssd------------ Trypanosoma_brucei ------------ntrtknkkrtkeviedevh---did-dt Trypanosoma_cruzi -------ntrskrgkrkgveevevheiants---pdp-va P Arabidopsis_thaliana ---------------------------------------- P Oryza_sativa ---------------------------------------- P Maize-R51A1 ---------------------------------------- P Maize-R51A2 ---------------------------------------- ============================================================================ B E_COLI ----------------------------------ai---- B MYCOBACTERIUM_SMEGMATIS ----------------------------------aqq--- B MYCOBACTERIUM_TUBERCULOSIS ----------------------------------tq---- B Acinetobacter_calcoaceticus ---------------------------------------- B Actinobacillus_pleuropneumoniae -----asdnkkaqkntvtk---------------qi---- B Actinobacillus_succinogenes -----atpndktk---------------------ps---- B Actinomyces_bovis ----------------------------------apq--- B Azotobacter_vinelandii ---------------------------------------- B Bacillus_clausii ---------------------------------------- B Bacillus_halodurans ---------------------------------------- B Bacillus_licheniformis ---------------------------------------- B Bacillus_megaterium ---------------------------------------- B Bacillus_subtilis ---------------------------------------- B Bordetella_pertussis -----ddktsk-----------------------aa---- B Burkholderia_fungorum -----eeskkgsa---------------------gl---- B Chromobacterium_violaceum -----------------------------------a---- B Clostridium_acetobutylicum ---------------------------------------- B Clostridium_thermocellum -----------------------------------i---- B Colwellia_psychrerythraea ---------------------------------------- B Corynebacterium_efficiens -----atkkttkaa--------------------pk---- B Desulfotalea_psychrophila -----v----------------------------gat--- B Enterococcus_faecalis ---------------------------------------- B Haemophilus_ducreyi -----aadkkaqkntatk----------------qi---- B Haemophilus_influenzae ----------------------------------at---- B Histophilus_somni ----------------------------------at---- B Kineococcus_radiotolerans ----------------------------------pa---- B Leifsonia_xyli -----------------------------------ps--- B Mannheimia_succiniciproducens ----------------------------------at---- B Nitrosomonas_europaea ---------------------------------------- B Nitrosomonas_eutropha ---------------------------------------- B Oceanobacillus_iheyensis ---------------------------------------- B Pasteurella_multocida ----------------------------------at---- B Photobacterium_profundum ---------------------------------------- B Photorhabdus_luminescens ----------------------------------ai---- B Proteus_mirabilis ----------------------------------ai---- B Pseudomonas_cepacia ---------------------------------------- B Pseudomonas_pseudomallei -----eeskkgs----------------------gl---- B Shewanella_amazonensis -----------------------------------ki--- B Shewanella_putrefaciens ----------------------------------kv---- B Streptomyces_avermitilis -----------------------------------a---- B Vibrio_alginolyticus ---------------------------------------- B Vibrio_angustum ---------------------------------------- B Vibrio_cholerae ---------------------------------------- B Vibrio_fischeri ---------------------------------------- B Vibrio_parahaemolyticus ---------------------------------------- B Vibrio_splendidus ---------------------------------------- B Vibrio_vulnificus ---------------------------------------- B Yersinia_enterocolitica ----------------------------------ai---- B Cupriavidus_metallidurans-Q1LR74 -----ddkkaga----------------------gv---- B Cupriavidus_metallidurans-RECA -----ddkkaga----------------------gv---- B Erwinia_carotovora-RECA -----------------------------------ai--- B Erwinia_carotovora-RECA_ERWCT -----------------------------------ai--- B Listeria_monocytogenes-RECA ---------------------------------------- B Listeria_monocytogenes-RECA_LISMF ---------------------------------------- B Neisseria_gonorrhoeae-RECA ---------------------------------------- B Neisseria_gonorrhoeae-RECA_VAR ---------------------------------------- B Salmonella_typhi-RECA ----------------------------------ai---- B Salmonella_typhi-RECA_SALPA ----------------------------------ai---- B Streptomyces_coelicolor-RECA -----------------------------------a---- B Streptomyces_coelicolor-RECA_STRL -----------------------------------a---- B Xylella_fastidiosa-RECA ---------------------------------------- B Xylella_fastidiosa-RECA_XYLFT ---------------------------------------- B Yersinia_pestis-RECA ----------------------------------ai---- B Yersinia_pestis-RECA_YERPS ----------------------------------ai---- B Mycobacterium_tuberculosis-RECA ----------------------------------tq---- B Mycobacterium_tuberculosis-RECA_M ----------------------------------tq---- B Neisseria_meningitidis-RECA ---------------------------------------- B Neisseria_meningitidis-RECA_NEIMA ---------------------------------------- B Neisseria_meningitidis-RECA_VAR ---------------------------------------- B Xanthomonas_vasicola-RECA_XANAC -----svspavsacaihrryispipksltri---tqm--- B Xanthomonas_vasicola-RECA_XANCP -----svspavsacaihrryispipksltri---tqm--- B Xanthomonas_vasicola-YP_201580 -----svspavsacaihrryispipksltri---tqm--- B Pseudomonas_aeruginosa-Q48F94 ---------------------------------------- B Pseudomonas_aeruginosa-RECA ---------------------------------------- B Pseudomonas_aeruginosa-RECA_PSEF5 ---------------------------------------- B Pseudomonas_aeruginosa-RECA_PSEFL ---------------------------------------- B Pseudomonas_aeruginosa-RECA_PSEPK ---------------------------------------- B Pseudomonas_aeruginosa-RECA_PSEPU ---------------------------------------- B Pseudomonas_aeruginosa-RECA_PSESM ---------------------------------------- ============================================================================ B DEINOCOCCUS_RADIODURANS ----------------------------------gsh--- B Deinococcus_geothermalis ---------------------------------------- B Thermus_aquaticus-RECA ---------------------------------------- B Thermus_aquaticus-RECA_THET2 ---------------------------------------- B Thermus_aquaticus-RECA_THET8 ---------------------------------------- B Thermus_aquaticus-RECA_THETH ---------------------------------------- ============================================================================ Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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