Rad51/RadA/RecA

                                           410       420       430       440
                                    ----:----|----:----|----:----|----:----|
  Consensus                         vexlxqxxxxxxxxxxxxixLVVVDSvxalfrxefigrdx
============================================================================
A PYROCOCCUS_FURIOSUS               VQqaedkik-ellntdrpVkLLIVDSLtshFRsEYIGRga
A Archaeoglobus_fulgidus            VDnakElae-klkkegrpVrLIIVDSLmshFRaEYVGRgt
A Pyrococcus_abyssi                 VQqaedkik-ellntdkpVkLLIVDSLtshFRsEYIGRga
============================================================================
A METHANOCOCCUS_VOLTAE              aEkIedliqegn-----nIkLVVIDSLtstFRnEYtGRgk
A Methanococcus_jannaschii          aEnVenliregh-----nIkLVIVDSLtstFRtEYIGRgk
A Methanococcus_maripaludis         aEkIedlikggn-----nIkLVIIDSLtstFRnEFtGRgk
============================================================================
A SULFOLOBUS_SOLFATARICUS           VDdLqElvs-kdp----sIkLIVVDSVtshFRaEYpGREn
A Desulfurococcus_amylolyticus      VDeLftfvp-kn-----dVrLVILDSVtshFRaEYpGREh
A Sulfolobus_acidocaldarius         VDdLqElit-kdp----aIkLIIVDSItshFRaEYpGREn
A Sulfolobus_tokodaii               VDdLqElis-kdp----aIkLVIVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA             VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH1     VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH2     VDkLftmvk-nd-----nIrLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_OH3     VDkLftmvk-nd-----nIkLVVVDSVtshFRvEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB1     VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB2     VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
A Aeropyrum_pernix-RADA_VAR_TB6     VDkLftmvk-nd-----nIkLVVVDSVtshFRaEFpGREn
============================================================================
* HUMAN                             Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* S_CEREVISIAE                      LDaaaQmms-es-----rfsLIVVDSVmALYRtDFsGR--
* Apis_mellifera                    Liqasammt-es-----ryaLLIVDSatgLYRtEYsGR--
* Aspergillus_flavus                LnqasQmmc-et-----rfsLLVVDSatALYRtDFnGR--
* Aspergillus_fumigatus             LnqasQmmc-et-----rfsLLVVDSatsLYRtDFnGR--
* Bovine                            Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* C_elegans                         Iiragamms-es-----ryaVVIVDcatAhFRnEYtGR--
* Candida_albicans                  LniaaEmma-es-----rfsLLIVDSImsLYRtDYaGR--
* Candida_glabrata                  LDaaaQmms-es-----rfsLIVVDSVmALYRtDFsGR--
* Canis_lupus                       Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Chaetomium_globosum               Lnqaaammc-et-----rfsLLVVDSatsLYRtDFLGR--
* Coccidioides_immitis              LnqasQmmc-et-----rfsLLVVDSatsLYRtDFsGR--
* Coprinus_cinereus                 Ltsasalms-es-----rfcLLIVDSctALYRtDFsGR--
* Cricetulus_griseus                Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Cryptococcus_neoformans           Lvqasamma-es-----rfsLLIVDSctsLYRtDFsGR--
* Danio_rerio                       Lyqasammt-es-----ryaLLIVDSatALYRtDYsGR--
* Debaryomyces_hansenii             LnhaaQmms-es-----rfscLIVDSImsLYRtDYsGR--
* D_melanogaster                    IQmaagmlf-es-----ryaLLIVDSamALYRsDYIGR--
* D_pseudoobscura                   LQmaagmlf-et-----ryaaVIVDSVmALYRsDYIGR--
* Emericella_nidulans               LnqasQmmc-et-----rfsLLVVDSatsLYRtDFnGR--
* Encephalitozoon_cuniculi          Likasamms-es-----kysVLIIDSatALYRtDFsGR--
* Eremothecium_gossypii             LDaaaQmms-es-----rfsLIVVDSImALYRtDFsGR--
* Chicken                           Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Gibberella_zeae                   Lnqaaammc-et-----rfsLLIVDSatsLYRtDFcGR--
* Kluyveromyces_lactis              LDaaaQmms-es-----rfsLIIVDSImALYRtDFsGR--
* Mouse                             Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Neurospora_crassa                 Lnqaaammc-et-----rfsLLIVDSatsLYRtDFLGR--
* Rabbit                            Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Pichia_angusta                    Lhqaasmmt-es-----rfsLLIVDSImALYRtDYsGR--
* Rat                               Lyqasammv-es-----ryaLLIVDSatALYRtDYsGR--
* Schizosaccharomyces_pombe         LQqaanmms-es-----rfsLLVVDSctALYRtDFsGR--
* Strongylocentrotus_purpuratus     Llqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Tetraodon_nigroviridis            Lyqasamma-es-----ryaLLIVDSatALYRtDYsGRvw
* Tribolium_castaneum               Lvhaaammm-es-----rycLLIVDSatsLYRtDYsGR--
* Ustilago_maydis                   Lmqasamma-es-----rfsLLIVDSLtsLYRtDFsGR--
* X_tropicalis                      Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* Yarrowia_lipolytica               LQmaanmmt-ks-----rfscLIVDSImALYRtDYaGR--
* X_laevis-RA51A                    Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
* X_laevis-RA51B                    Lyqasamma-es-----ryaLLIVDSatALYRtDYsGR--
  Cryptosporidium_hominis           LQsavammt-es-----rfaLMIVDSatALYRsEYnGR--
  Cryptosporidium_parvum            LQsavammt-es-----rfaLMIVDSatALYRsEYnGR--
  Dictyostelium_discoideum          Lvqasamms-es-----ryaLLIVDSatALYRtDYaGR--
  Entamoeba_histolytica             LQmasglma-ke-----rygLLIIDSatALYRtDYsGR--
  Leishmania_donovani               Llqasamma-en-----rfaLIIVDSatALYRtDYsGR--
  Leishmania_tropica                Llqasamma-en-----rfaLIIVDSatALYRtDYsGR--
  Plasmodium_berghei                Lidasamma-dt-----rfaLLIVDSatALYRsEYtGR--
  Plasmodium_falciparum             Lidasamma-da-----rfaLLIVDSatALYRsEYIGR--
  Tetrahymena_thermophila           Lvqaaalma-es-----kyaLLIVDSatALYRtDYsGR--
  Theileria_annulata                Lveasamma-qt-----rfaLLIVDSatsLYRsDYsGR--
  Theileria_parva                   Lveasamma-qt-----rfaLLIVDSatsLYRsDYsGR--
  Trypanosoma_brucei                Llqasatma-eh-----rVaIIVVDSatALYRtDYnGR--
  Trypanosoma_cruzi                 Llqasamma-en-----rfaIIIVDSatALYRtDYsGR--
P Arabidopsis_thaliana              Lleaasmmi-et-----rfaLLIVDSatALYRtDFsGR--
P Oryza_sativa                      Lleaasmmi-et-----rfaLMIVDSatALYRtDFsGR--
P Maize-R51A1                       Lleaasmmi-et-----rfaLMVVDSatALYRtDFsGR--
P Maize-R51A2                       Lleaasmmv-et-----rfaLMVVDSatALYRtDFsGR--
============================================================================
B E_COLI                            cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B MYCOBACTERIUM_SMEGMATIS           aDmLvR-sg--a------LdIIVIDSVaALvpraeIegEm
B MYCOBACTERIUM_TUBERCULOSIS        aDmLiR-sg--a------LdIVLIDSVaALvpraeLegEm
B Acinetobacter_calcoaceticus       aDmLvR-sg--a------IdLIVVDSVaALtpkaeIegEm
B Actinobacillus_pleuropneumoniae   cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Actinobacillus_succinogenes       cDaLvR-sg--a------IdVIIVDSVaALtpkaeIegDm
B Actinomyces_bovis                 aDmLvR-sg--a------IdIIVIDSVaALvpraeIegEm
B Azotobacter_vinelandii            tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Bacillus_clausii                  aEaLvR-sg--a------LdIIVIDSVaALvpkaeIegEm
B Bacillus_halodurans               aEaLvR-sg--a------IdVIVIDSVaALvpkaeIegEm
B Bacillus_licheniformis            aEaLvR-sg--a------VdIVVIDSVaALvpkaeIegDm
B Bacillus_megaterium               aEaLvR-sg--a------VdIIVVDSVaALvpkaeIegEm
B Bacillus_subtilis                 aEaLvR-sg--a------VdIVVVDSVaALvpkaeIegDm
B Bordetella_pertussis              tDaLvR-sg--s------VdLIVIDSVaALvpkaeIegEm
B Burkholderia_fungorum             aDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Chromobacterium_violaceum         cDmLvR-ss--g------VdVIVVDSVaALvpkaeIegEm
B Clostridium_acetobutylicum        aEaLvR-sg--a------IdVIVVDSVaALvpkaeIegEm
B Clostridium_thermocellum          aEaLvR-sg--a------IdVIVIDSVaALvpkaeIdgEm
B Colwellia_psychrerythraea         VDmLtR-sg--a------IdVIVVDSVaALtpkaeIegDm
B Corynebacterium_efficiens         aDmLvR-sg--a------IdILVIDSVaALtpkaeIegEm
B Desulfotalea_psychrophila         aEiLiR-sg--g------VdIIVVDSVaALtpkaeIdgNv
B Enterococcus_faecalis             aDaLvs-sg--a------IdIVVIDSVaALvpraeIdgEm
B Haemophilus_ducreyi               cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Haemophilus_influenzae            cDaLvR-sg--a------IdVIIVDSVaALtpkaeIegDm
B Histophilus_somni                 cDaLvR-sg--a------VdVVIVDSVaALtpkaeIegEm
B Kineococcus_radiotolerans         aDmLiR-sg--a------LdIIVIDSVaALvpkaeIegEm
B Leifsonia_xyli                    aDmLvR-sg--s------IdLIVIDSVaALvpraeIegEm
B Mannheimia_succiniciproducens     cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegDm
B Nitrosomonas_europaea             tDmLvR-sg--s------VdVVVVDSVaALtpraeIegEm
B Nitrosomonas_eutropha             tDmLvR-sg--s------VdIVVIDSVaALtpraeIegEm
B Oceanobacillus_iheyensis          aEaLvR-sg--a------VdIIVVDSVaALvpkaeIegEm
B Pasteurella_multocida             cDaLvR-sg--a------VdVIIVDSVaALtpkaeIegEm
B Photobacterium_profundum          cDaLaR-sg--a------VdLIVIDSVaALtpkaeIegEm
B Photorhabdus_luminescens          cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Proteus_mirabilis                 cDaLsR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Pseudomonas_cepacia               tDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Pseudomonas_pseudomallei          VDaLvR-sg--s------IdMIVIDSVaALvpkaeIegEm
B Shewanella_amazonensis            cDaLtR-sg--a------VdVIIVDSVaALvpkaeIegEi
B Shewanella_putrefaciens           cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Streptomyces_avermitilis          VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Vibrio_alginolyticus              cDaLaR-sg--a------IdVMVVDSVaALtpkaeIegEm
B Vibrio_angustum                   cDaLaR-sg--a------VdLIVVDSVaALtpkaeIegEm
B Vibrio_cholerae                   cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEm
B Vibrio_fischeri                   cDaLaR-sg--a------VdVMVIDSVaALtpkaeIegEm
B Vibrio_parahaemolyticus           cDaLaR-sg--a------IdVMVVDSVaALtpkaeIegEm
B Vibrio_splendidus                 cDaLaR-sg--a------IdVLVIDSVaALtpkaeIegEm
B Vibrio_vulnificus                 cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEm
B Yersinia_enterocolitica           cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Cupriavidus_metallidurans-Q1LR74  tDaLvR-sg--s------IdLIVIDSVaALvpkaeIegEm
B Cupriavidus_metallidurans-RECA    tDaLvR-sg--s------IdLIVIDSVaALvpkaeIegEm
B Erwinia_carotovora-RECA           cDaLsR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Erwinia_carotovora-RECA_ERWCT     cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Listeria_monocytogenes-RECA       aEaLvR-sg--a------VdMLVIDSVaALvpraeIegEm
B Listeria_monocytogenes-RECA_LISMF aEaLvR-sg--a------VdMLVIDSVaALvpraeIegEm
B Neisseria_gonorrhoeae-RECA        cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_gonorrhoeae-RECA_VAR    cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Salmonella_typhi-RECA             cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Salmonella_typhi-RECA_SALPA       cDaLaR-sg--a------VdVIVVDSVaALtpkaeIegEi
B Streptomyces_coelicolor-RECA      VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Streptomyces_coelicolor-RECA_STRL VDmLvR-sg--a------LdLIVIDSVaALvpraeIegEm
B Xylella_fastidiosa-RECA           aDmLvR-sg--s------IdIMVIDSVaALtpraeIegEm
B Xylella_fastidiosa-RECA_XYLFT     aDmLvR-sg--s------IdIMVIDSVaALtpraeIegEm
B Yersinia_pestis-RECA              cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Yersinia_pestis-RECA_YERPS        cDaLtR-sg--a------VdVIIVDSVaALtpkaeIegEi
B Mycobacterium_tuberculosis-RECA   aDmLiR-sg--a------LdIVVIDSVaALvpraeLegEm
B Mycobacterium_tuberculosis-RECA_M aDmLiR-sg--a------LdILVIDSVaALvpraeLegEm
B Neisseria_meningitidis-RECA       cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_meningitidis-RECA_NEIMA cDtLvR-sg--g------IdMVVVDSVaALvpkaeIegDm
B Neisseria_meningitidis-RECA_VAR   cDtLvR-sg--g------VdMVVVDSVaALvpkaeIegDm
B Xanthomonas_vasicola-RECA_XANAC   aDmLvR-sg--s------VdIVVVDSVaALtpkaeIegEm
B Xanthomonas_vasicola-RECA_XANCP   aDmLvR-ss--s------VdIVVIDSVaALtpkaeIegEm
B Xanthomonas_vasicola-YP_201580    aDmLvR-ss--s------VdIVVIDSVaALtpkaeIegEm
B Pseudomonas_aeruginosa-Q48F94     tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA       tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEF5 tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEFL tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEPK tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSEPU tDmLvR-sn--a------VdVIIVDSVaALvpkaeIegEm
B Pseudomonas_aeruginosa-RECA_PSESM tDmLvR-sn--a------IdVIVVDSVaALvpkaeIegEm
============================================================================
B DEINOCOCCUS_RADIODURANS           MElLvR-sg--a------IdVVVVDSVaALtpraeIegDm
B Deinococcus_geothermalis          MElLvR-sg--a------IdVVVVDSVaALtpraeIegEm
B Thermus_aquaticus-RECA            VElLaR-sg--a------VdVIVVDSVaALvpkaeIegEm
B Thermus_aquaticus-RECA_THET2      VElLaR-sg--a------VdVIVVDSVaALvpraeIegEm
B Thermus_aquaticus-RECA_THET8      VElLaR-sg--a------VdVIVVDSVaALvpraeIegEm
B Thermus_aquaticus-RECA_THETH      VElLaR-sg--a------VdVIVVDSVaALvpgaeIegEm
============================================================================
  Consensus                         vexlxqxxxxxxxxxxxxixLVVVDSvxalfrxefigrdx

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