Rad51/RadA/RecA

                                           490       500       510       520
                                    ----:----|----:----|----:----|----:----|
  Consensus                         kixvxfgxxsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS               RpdafFGdpTrpigghilahsa------------------
A Archaeoglobus_fulgidus            RpdVlFGdpTkpvgghivahta------------------
A Pyrococcus_abyssi                 RpdafFGdpTrpigghilahsa------------------
============================================================================
A METHANOCOCCUS_VOLTAE              KpdafFGmaeqaigghivghaa------------------
A Methanococcus_jannaschii          RpdalFGpseqaigghivghaa------------------
A Methanococcus_maripaludis         KpdayFGvaeqaigghvvghaa------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS           RpdMfYGdpTvavgghtlyhvp------------------
A Desulfurococcus_amylolyticus      RpdVfYGdpTtavgghvlahtp------------------
A Sulfolobus_acidocaldarius         RpdMfYGdpTtavgghtlyhvp------------------
A Sulfolobus_tokodaii               RpdMfYGdpTvavgghtlyhvp------------------
A Aeropyrum_pernix-RADA             RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH1     RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH2     RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_OH3     RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB1     RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB2     RpdVfYGdpTqavgghvlghap------------------
A Aeropyrum_pernix-RADA_VAR_TB6     RpdVfYGdpTqavgghvlghap------------------
============================================================================
* HUMAN                             QVd-g--a-a--------------------------m-fa
* S_CEREVISIAE                      QVd-g--g-m--------------------------a-fn
* Apis_mellifera                    QVd-g--a-a--------------------------smfg
* Aspergillus_flavus                QVd-ggps-a--------------------------m-fn
* Aspergillus_fumigatus             QVd-ggps-a--------------------------m-fn
* Bovine                            QVd-g--a-a--------------------------m-fa
* C_elegans                         QVdgg--a-S--------------------------m-fq
* Candida_albicans                  QVd-g-ms-g--------------------------m-fn
* Candida_glabrata                  QVd-g--g-m--------------------------s-fn
* Canis_lupus                       QVd-g--a-a--------------------------m-fa
* Chaetomium_globosum               QVd-ggps-a--------------------------m-fn
* Coccidioides_immitis              QVe-ggps-a--------------------------m-fn
* Coprinus_cinereus                 tpd-a--apg--------------------------p-ya
* Cricetulus_griseus                QVd-g--a-a--------------------------m-ft
* Cryptococcus_neoformans           QVd-g--g-q--------------------------f-av
* Danio_rerio                       QVd-g--a-a--------------------------m-fs
* Debaryomyces_hansenii             QVd-g--asa--------------------------m-fn
* D_melanogaster                    sLd-g--a-p--------------------------g-mf
* D_pseudoobscura                   QLdgg--g-g--------------------------m-fv
* Emericella_nidulans               QVd-ggps-a--------------------------m-fn
* Encephalitozoon_cuniculi          nVd-g--avg--------------------------m-ft
* Eremothecium_gossypii             QVd-g--a-a--------------------------m-fn
* Chicken                           QVd-g--a-a--------------------------m-fa
* Gibberella_zeae                   QVd-ggps-a--------------------------m-fn
* Kluyveromyces_lactis              QVd-g--g-m--------------------------m-fn
* Mouse                             QVd-g--a-a--------------------------m-fa
* Neurospora_crassa                 QVd-ggps-a--------------------------m-fn
* Rabbit                            QVd-g--a-a--------------------------m-fa
* Pichia_angusta                    QVd-g--g-a--------------------------i-fn
* Rat                               QVd-g--a-a--------------------------m-fa
* Schizosaccharomyces_pombe         QVd-g--i-S----------------------------fn
* Strongylocentrotus_purpuratus     QVd-g--a-a--------------------------m-ft
* Tetraodon_nigroviridis            pVs-g--v-f--------------------------k-tc
* Tribolium_castaneum               QVd-g--a-a--------------------------m-fn
* Ustilago_maydis                   QVd-g--a-T--------------------------a-ft
* X_tropicalis                      QVd-g--a-a--------------------------m-fa
* Yarrowia_lipolytica               QVd-g--a-v----------------------------fn
* X_laevis-RA51A                    QVd-g--a-a--------------------------m-fa
* X_laevis-RA51B                    QVd-g--a-a--------------------------m-fa
  Cryptosporidium_hominis           KVd-a--m-a--------------------------a-mf
  Cryptosporidium_parvum            KVd-a--m-a--------------------------a-mf
  Dictyostelium_discoideum          sVd-g--agg--------------------------m-fn
  Entamoeba_histolytica             QVd-g-qa-S--------------------------m-fg
  Leishmania_donovani               nVd-g--saq--------------------------m-fq
  Leishmania_tropica                nVd-g--s-a---------------------q----m-fq
  Plasmodium_berghei                KVd-a--m-S--------------------------m-fg
  Plasmodium_falciparum             KVd-a--m-S--------------------------m-fg
  Tetrahymena_thermophila           QVd-g--a-a--------------------------m-fa
  Theileria_annulata                RVd-a--m-Stffgilllyiiiycyilinickfyidk-fv
  Theileria_parva                   KVd-a--m-S--------------------------t-ff
  Trypanosoma_brucei                nVd-g--a-ap-------------------------t-fq
  Trypanosoma_cruzi                 nVd-g--s-a---------------------q----m-fq
P Arabidopsis_thaliana              QVd-g--s-a--------------------------l-fa
P Oryza_sativa                      QVd-g--s-a--------------------------m-fa
P Maize-R51A1                       QVd-g--s-a--------------------------m-fa
P Maize-R51A2                       QVd-g--a-a--------------------------m-fa
============================================================================
B E_COLI                            KIgVmFG--Npetttggnalkfya----------------
B MYCOBACTERIUM_SMEGMATIS           KIgVmFG--Spetttggkalkfya----------------
B MYCOBACTERIUM_TUBERCULOSIS        KIgVmFG--Spetttggkalkfya----------------
B Acinetobacter_calcoaceticus       KIgVmFG--Spetttggnalkfya----------------
B Actinobacillus_pleuropneumoniae   KIgVmFG--Npetttggnalkfya----------------
B Actinobacillus_succinogenes       KIgVmFG--Npetttggnalkfys----------------
B Actinomyces_bovis                 KIgVmFG--Spetttggkalkfya----------------
B Azotobacter_vinelandii            KIgVmFG--Npetttganalkfya----------------
B Bacillus_clausii                  KVgVmFG--Npettpggralkfys----------------
B Bacillus_halodurans               KVgVmFG--Npettpggralkfys----------------
B Bacillus_licheniformis            KVgVmFG--Npettpggralkfys----------------
B Bacillus_megaterium               KVgVmFG--Npettpggralkfys----------------
B Bacillus_subtilis                 KVgVmFG--Npettpggralkfys----------------
B Bordetella_pertussis              KIgVmFG--Npetttggnalkfys----------------
B Burkholderia_fungorum             KIgVmFG--Npetttggnalkfya----------------
B Chromobacterium_violaceum         KIgVmFG--Npetttggnalkfya----------------
B Clostridium_acetobutylicum        KVgImFG--Npettpggralkfya----------------
B Clostridium_thermocellum          KVgVmFG--Npettpggralkfya----------------
B Colwellia_psychrerythraea         KIgVmFG--Spetttggnalkfya----------------
B Corynebacterium_efficiens         KIgVmFG--Spetttggkalkfya----------------
B Desulfotalea_psychrophila         KIgVmFG--Spetttggnalkfyc----------------
B Enterococcus_faecalis             KVgVmFG--Npettpggralkfya----------------
B Haemophilus_ducreyi               KIgVmFG--Npetttggnalkfya----------------
B Haemophilus_influenzae            KIgVmFG--Npetttggnalkfys----------------
B Histophilus_somni                 KIgViFG--Npetttggnalkfya----------------
B Kineococcus_radiotolerans         KIgVmFG--Spetttggkalkfya----------------
B Leifsonia_xyli                    KVgVfFG--Spettaggkalkfya----------------
B Mannheimia_succiniciproducens     KIgVmFG--Npetttggnalkfys----------------
B Nitrosomonas_europaea             KIgViFG--Npetttggnalkfya----------------
B Nitrosomonas_eutropha             KIgVmFG--Npetttggnalkfya----------------
B Oceanobacillus_iheyensis          KVgVmFG--Npettpggralkfys----------------
B Pasteurella_multocida             KIgVmFG--Npetttggnalkfya----------------
B Photobacterium_profundum          KIgVmFG--Npetttggnalkfya----------------
B Photorhabdus_luminescens          KIgVmFG--Npetttggnalkfya----------------
B Proteus_mirabilis                 KIgVmFG--Npetttggnalkfya----------------
B Pseudomonas_cepacia               KIgVmFG--Npetttggnalkfys----------------
B Pseudomonas_pseudomallei          KIgVmFG--Npetttggnalkfys----------------
B Shewanella_amazonensis            KIgVmFG--Npetttggnalkfya----------------
B Shewanella_putrefaciens           KIgVmFG--Npetttggnalkfya----------------
B Streptomyces_avermitilis          KIgVmFG--Spetttggralkfya----------------
B Vibrio_alginolyticus              KIgVmFG--Npetttggnalkfya----------------
B Vibrio_angustum                   KIgVmFG--Npetttggnalkfya----------------
B Vibrio_cholerae                   KIgVmFG--Npetttggnalkfya----------------
B Vibrio_fischeri                   KIgVmFG--Npetttggnalkfya----------------
B Vibrio_parahaemolyticus           KIgVmFG--Npetttggnalkfya----------------
B Vibrio_splendidus                 KIgVmFG--Npetttggnalkfya----------------
B Vibrio_vulnificus                 KIgVmFG--Npetttggnalkfya----------------
B Yersinia_enterocolitica           KIgVmFG--Npetttggnalkfya----------------
B Cupriavidus_metallidurans-Q1LR74  KIgVmFG--Spetttggnalkfya----------------
B Cupriavidus_metallidurans-RECA    KIgVmFG--Spetttggnalkfya----------------
B Erwinia_carotovora-RECA           KIgVmFG--Npetttggnalkfya----------------
B Erwinia_carotovora-RECA_ERWCT     KIgVmFG--Npetttggnalkfya----------------
B Listeria_monocytogenes-RECA       KVgVmFG--Npeitpggralkfys----------------
B Listeria_monocytogenes-RECA_LISMF KVgVmFG--Npeitpggralkfys----------------
B Neisseria_gonorrhoeae-RECA        KIgVmFG--Spetttggnalkfys----------------
B Neisseria_gonorrhoeae-RECA_VAR    KIgVmFG--Spetttggnalkfys----------------
B Salmonella_typhi-RECA             KIgVmFG--Npetttggnalkfya----------------
B Salmonella_typhi-RECA_SALPA       KIgVmFG--Npetttggnalkfya----------------
B Streptomyces_coelicolor-RECA      KIgVmFG--Spetttggralkfya----------------
B Streptomyces_coelicolor-RECA_STRL KIgVmFG--Spetttggralkfya----------------
B Xylella_fastidiosa-RECA           KIgVmmpgqSpetttggnalkfya----------------
B Xylella_fastidiosa-RECA_XYLFT     KIgImmpgqSpetttggnalkfya----------------
B Yersinia_pestis-RECA              KIgVmFG--Npetttggnalkfya----------------
B Yersinia_pestis-RECA_YERPS        KIgVmFG--Npetttggnalkfya----------------
B Mycobacterium_tuberculosis-RECA   KIgVmFG--Spetttggkalkfya----------------
B Mycobacterium_tuberculosis-RECA_M KIgVmFG--Spetttggkalkfya----------------
B Neisseria_meningitidis-RECA       KIgVmFG--Spetttggnalkfys----------------
B Neisseria_meningitidis-RECA_NEIMA KIgVmFG--Spetttggnalkfys----------------
B Neisseria_meningitidis-RECA_VAR   KIgVmFG--Spetttggnalkfys----------------
B Xanthomonas_vasicola-RECA_XANAC   KIgVmmpgqSpevttggnalkfya----------------
B Xanthomonas_vasicola-RECA_XANCP   KIgVmmpgqSpevttggnalkfya----------------
B Xanthomonas_vasicola-YP_201580    KIgVmmpgqSpevttggnalkfya----------------
B Pseudomonas_aeruginosa-Q48F94     KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA       KIgVmFG--Npetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEF5 KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEFL KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEPK KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSEPU KIgVmFG--Spetttggnalkfya----------------
B Pseudomonas_aeruginosa-RECA_PSESM KIgVmFG--Spetttggnalkfya----------------
============================================================================
B DEINOCOCCUS_RADIODURANS           KIgVmYGnpetttggralkfya------------------
B Deinococcus_geothermalis          KIgVmYGnpetttggralkfya------------------
B Thermus_aquaticus-RECA            KVgVmYGnpettpggralkfys------------------
B Thermus_aquaticus-RECA_THET2      KVgVtYGnpettpggralkfya------------------
B Thermus_aquaticus-RECA_THET8      KVgVtYGnpettpggralkfya------------------
B Thermus_aquaticus-RECA_THETH      KVgVtYGnpettpggralkfya------------------
============================================================================
  Consensus                         kixvxfgxxsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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