Rad51/RadA/RecA

530 540 550 560 ----:----|----:----|----:----|----:----| Consensus xxxxxxxxxxxxxxxxSlRLnLKKxqxxxxxxxxxxxdqr ============================================================================ A PYROCOCCUS_FURIOSUS ----------------TLRVyLRKgKg----------gKR A Archaeoglobus_fulgidus ----------------TfRIyLKKgKd----------DlR A Pyrococcus_abyssi ----------------TLRVyLRKgKg----------gKR ============================================================================ A METHANOCOCCUS_VOLTAE ----------------TfRffVRKgKg----------DKR A Methanococcus_jannaschii ----------------TfRIfLRKaKg----------DKR A Methanococcus_maripaludis ----------------TfRffLRKsKg----------DKR ============================================================================ A SULFOLOBUS_SOLFATARICUS ----------------gIRIqLKKsRg----------NRR A Desulfurococcus_amylolyticus ----------------gVRIqLRKsKg----------NKR A Sulfolobus_acidocaldarius ----------------gIRVqLKKsRg----------NKR A Sulfolobus_tokodaii ----------------gIRVqLKKsRg----------NKR A Aeropyrum_pernix-RADA ----------------gVRVyLKKsRg----------NKR A Aeropyrum_pernix-RADA_VAR_OH1 ----------------gVRVyLKKsRg----------NKR A Aeropyrum_pernix-RADA_VAR_OH2 ----------------gVRVyLKKsRg----------NKR A Aeropyrum_pernix-RADA_VAR_OH3 ----------------gVRVyLKKsRg----------DKR A Aeropyrum_pernix-RADA_VAR_TB1 ----------------gVRVyLKKgRg----------NKR A Aeropyrum_pernix-RADA_VAR_TB2 ----------------gVRVyLKKsRg----------sKR A Aeropyrum_pernix-RADA_VAR_TB6 ----------------gVRVyLKKsRg----------NKR ============================================================================ * HUMAN adpkkpiggniiahasTtRLyLRKgRg----------EtR * S_CEREVISIAE pdpkkptggnimahssTtRLgfKKgKg----------cQR * Apis_mellifera gdqkkpigghiiahasTtRLyLRKgRg----------EtR * Aspergillus_flavus pdpkkpiggniiahasTtRLSLKKgRg----------EtR * Aspergillus_fumigatus pdpkkpiggniiahasTtRLSLKKgRg----------EtR * Bovine adpkkpiggniiahasTtRLyLRKgRg----------EtR * C_elegans adakkpigghiiahmsTtRLyLRKgKg----------EnR * Candida_albicans pdpkkpiggniiahssTtRLSfKKgRg----------EtR * Candida_glabrata pdpkkpiggnimahssTtRLgfKKgKg----------cQR * Canis_lupus adpkkpiggniiahasTtRLyLRKgRg----------EtR * Chaetomium_globosum pdpkkpiggnimahssTtRISLKKgRg----------EtR * Coccidioides_immitis pdpkkpiggniiahasTtRLSLKKgRg----------EtR * Coprinus_cinereus gnekkpiggnimahasTtRLqLKKgRg----------NtR * Cricetulus_griseus adpkkpiggniiahasTtRLyLRKgRg----------EtR * Cryptococcus_neoformans adakkpiggnimahasTtRLNLRKgRg----------tsR * Danio_rerio adpkkpiggnilahasTtRLyLRKgRg----------EtR * Debaryomyces_hansenii pdpkkpiggniiahssTtRLSfKKgRa----------EQR * D_melanogaster -dakkpigghimahssTtRLyLRKgKg----------EtR * D_pseudoobscura adakkpvgghilahasTtRLyLRKgKg----------EtR * Emericella_nidulans pdpkkpiggniiahasTtRLSLKKgRg----------EtR * Encephalitozoon_cuniculi gdikkpiggnimahasTtRLyLRKgRg----------EtR * Eremothecium_gossypii pdpkkpiggnimahssTtRLgfKKgKg----------cQR * Chicken adpkkpiggniiahasTtRLyLRKgRg----------EtR * Gibberella_zeae pdpkkpiggniiahasTtRISLKKgRa----------EtR * Kluyveromyces_lactis pdpkkpfggnimahssTtRLgfKKgKg----------pQR * Mouse adpkkpiggniiahasTtRLyLRKgRg----------EtR * Neurospora_crassa pdpkkpiggniiahasTtRISLKKgRg----------EtR * Rabbit adpkkpiggniiahasTtRLyLRKgRg----------EtR * Pichia_angusta pdpkkpiggnivahssTtRLyfKKaKg----------anR * Rat adpkkpiggniiahasTtRLyLRKgRg----------EtR * Schizosaccharomyces_pombe pdpkkpiggnilahssTtRLSLRKgRg----------EQR * Strongylocentrotus_purpuratus sdpkkpigghimahasTtRLyLRKgRg----------EtR * Tetraodon_nigroviridis gygiteetsefvqlvlfavctLRKgRg----------EtR * Tribolium_castaneum adpkkpiggnimahssTtRLSLRKgRg----------EaR * Ustilago_maydis adakkpiggnivahasTtRLSLRKgRg----------NQR * X_tropicalis adpkkpiggniiahasTtRLyLRKgRg----------EtR * Yarrowia_lipolytica pdpkkpiggnivahasTtRLyfKKgRg----------vQR * X_laevis-RA51A adpkkpiggniiahasTtRLyLRKgRg----------EtR * X_laevis-RA51B adpkkpiggniiahasTtRLyLRKgRg----------EtR Cryptosporidium_hominis qndkvpiggniiahasqtRLfLKKgRg----------EtR Cryptosporidium_parvum qndkvpiggniiahasqtRLfLKKgRg----------EtR Dictyostelium_discoideum pdpkkpigghimahssTtRLSLRKgKg----------EmR Entamoeba_histolytica gdtkkpvggniiahasTtRLyLRKgKg----------EaR Leishmania_donovani adskkpigghimahasTtRLSLRKgRg----------EQR Leishmania_tropica adskkpigghimahasTtRLSLRKgRg----------EQR Plasmodium_berghei ghekipiggniiahasqtRLyLRKgRg----------EsR Plasmodium_falciparum ghekipiggniiahasqtRLyLRKgRg----------EsR Tetrahymena_thermophila gdmkkpiggnimahasTtRLyLRKgRg----------EsR Theileria_annulata gndklpvgghiiahasqtRLfLRQsKg----------EsR Theileria_parva gndklpvgghiiahasqtRLfLRQsKg----------EsR Trypanosoma_brucei adskkpigghimahasTtRLSLRKgRg----------EQR Trypanosoma_cruzi adakkpigghimahasTtRLSLRKgRg----------EQR P Arabidopsis_thaliana gpqfkpiggnimahatTtRLaLRKgRa----------EER P Oryza_sativa gpqikpiggnimahasTtRLaLRKgRg----------EER P Maize-R51A1 gpqfkpiggnimahasTtRLaLRKgRg----------EER P Maize-R51A2 gpqikpiggnimahasTtRLfLRKgRg----------EER ============================================================================ B E_COLI ----------------SVRLDIRRigavkegenvvg-sEt B MYCOBACTERIUM_SMEGMATIS ----------------SVRLDVRRiEtlkdgtdavg-NRt B MYCOBACTERIUM_TUBERCULOSIS ----------------SVRMDVRRiEtlkdgtnavg-NRt B Acinetobacter_calcoaceticus ----------------SVRLDIRRigqvkegdeiig-sEt B Actinobacillus_pleuropneumoniae ----------------SVRLDIRRsgvvkdgdevvg-sEt B Actinobacillus_succinogenes ----------------SVRLDIRRigsvkagdeiig-NEt B Actinomyces_bovis ----------------SVRLDVRRiEtlkdgsdavg-NRt B Azotobacter_vinelandii ----------------SVRLDIRRtgavkesdevig-sEt B Bacillus_clausii ----------------SVRLeVRRaEalkqgneivg-NRt B Bacillus_halodurans ----------------SVRLeVRRaEtlkqgndmvg-NKt B Bacillus_licheniformis ----------------SVRLeVRRaEqlkqgndvmg-NKt B Bacillus_megaterium ----------------SVRLeVRRaEqlkqgndivg-NKt B Bacillus_subtilis ----------------SVRLeVRRaEqlkqgndvmg-NKt B Bordetella_pertussis ----------------SVRLDIRRigaikkgdevvg-NEt B Burkholderia_fungorum ----------------SVRLDIRRigsikkndevig-NEt B Chromobacterium_violaceum ----------------SVRLDIRRtggikkgdevig-Ndt B Clostridium_acetobutylicum ----------------SVRMDIRKidtikqgeemig-NRv B Clostridium_thermocellum ----------------SVRLDVRRlEsikqgnevig-sRt B Colwellia_psychrerythraea ----------------SVRLDIRRigavkngdeivg-NEt B Corynebacterium_efficiens ----------------SVRIDVRRiQtlkdgqdaig-NRt B Desulfotalea_psychrophila ----------------SeRLDIRRigaikdgqeitg-NRt B Enterococcus_faecalis ----------------TVRLeVRRaEqlkqgtdivg-NRt B Haemophilus_ducreyi ----------------SVRLDIRRsgvvkdgdevvg-sEt B Haemophilus_influenzae ----------------SVRLDIRRtgsvkdgeniig-NEt B Histophilus_somni ----------------SVRLDIRRvgsikngdevig-NEt B Kineococcus_radiotolerans ----------------SVRLDVRRiEtlkdgtnpvg-NRt B Leifsonia_xyli ----------------SVRLDIRRiEtlkdgtdavg-NRt B Mannheimia_succiniciproducens ----------------SVRLDIRRvgavkdgdeiig-NEt B Nitrosomonas_europaea ----------------SVRLDIRRtgsikrgeemvg-NEt B Nitrosomonas_eutropha ----------------SVRLDIRRtgsikrgeeivg-NEt B Oceanobacillus_iheyensis ----------------SVRLeVRRaEtlklgndavg-NKa B Pasteurella_multocida ----------------SVRLDIRRtgaikegeevig-NEt B Photobacterium_profundum ----------------SVRLDIRRtgaikdgdevvg-NEt B Photorhabdus_luminescens ----------------SVRLDIRRigsvkngeevvg-sEt B Proteus_mirabilis ----------------SVRLDIRRigsvkngdevig-sEt B Pseudomonas_cepacia ----------------SVRLDIRRigsikkndevig-NEt B Pseudomonas_pseudomallei ----------------SVRLDIRRigsikkndevig-NEt B Shewanella_amazonensis ----------------SVRLDIRRtgaikegdevvg-NEt B Shewanella_putrefaciens ----------------SVRLDIRRtgaikegdevvg-NEt B Streptomyces_avermitilis ----------------SVRLDIRRiEtlkdgtdavg-NRt B Vibrio_alginolyticus ----------------SVRLDIRRtgaikegdevvg-NEt B Vibrio_angustum ----------------SVRLDIRRtgaikegdevvg-NEt B Vibrio_cholerae ----------------SVRLDIRRtgaikegeevvg-NEt B Vibrio_fischeri ----------------SVRLDIRRtgavkdgdevvg-NEt B Vibrio_parahaemolyticus ----------------SVRLDIRRtgaikegdevvg-NEt B Vibrio_splendidus ----------------SVRLDIRRtgaikdgdevvg-NEt B Vibrio_vulnificus ----------------SVRLDIRRtgaikegdevvg-NEt B Yersinia_enterocolitica ----------------SVRLDIRRigavkdgdvvvg-sEt B Cupriavidus_metallidurans-Q1LR74 ----------------SVRLDIRRigsikkgdevvg-NEt B Cupriavidus_metallidurans-RECA ----------------SVRLDIRRigsikkgdevvg-NEt B Erwinia_carotovora-RECA ----------------SVRLDIRRigsvkngdevvg-sEt B Erwinia_carotovora-RECA_ERWCT ----------------SVRLDIRRtgaikegeevvg-sEt B Listeria_monocytogenes-RECA ----------------TVRLeVRRaEqlkqgtdvmg-NKt B Listeria_monocytogenes-RECA_LISMF ----------------TVRLeVRRaEqlkqgtdvmg-NKt B Neisseria_gonorrhoeae-RECA ----------------SVRLDIRRtgsikkgeevlg-NEt B Neisseria_gonorrhoeae-RECA_VAR ----------------SVRLDIRRtgsikkgeevlg-NEt B Salmonella_typhi-RECA ----------------SVRLDIRRigavkegdnvvg-sEt B Salmonella_typhi-RECA_SALPA ----------------SVRLDIRRigavkegdnvvg-sEt B Streptomyces_coelicolor-RECA ----------------SVRLDIRRiEtlkdgtdavg-NRt B Streptomyces_coelicolor-RECA_STRL ----------------SVRLDIRRiEtlkdgtdavg-NRt B Xylella_fastidiosa-RECA ----------------SVRLDIRRigaikkgdeiig-NQt B Xylella_fastidiosa-RECA_XYLFT ----------------SVRLDIRRigaikkgdeiig-NQt B Yersinia_pestis-RECA ----------------SVRLDIRRigavkdgdvvvg-sEt B Yersinia_pestis-RECA_YERPS ----------------SVRLDIRRigavkdgdvvvg-sEt B Mycobacterium_tuberculosis-RECA ----------------SVRMDVRRvEtlkdgtnavg-NRt B Mycobacterium_tuberculosis-RECA_M ----------------SVRMDVRRiEtlkdgtnavg-NRt B Neisseria_meningitidis-RECA ----------------SVRLDIRRtgsikkgeevlg-NEt B Neisseria_meningitidis-RECA_NEIMA ----------------SVRLDIRRtgsikkgeevlg-NEt B Neisseria_meningitidis-RECA_VAR ----------------SVRLDIRRtgsikkgeevlg-NEt B Xanthomonas_vasicola-RECA_XANAC ----------------SVRLDIRRigaikkgdeiig-NQt B Xanthomonas_vasicola-RECA_XANCP ----------------SVRLDIRRigaikkgdeiig-NQt B Xanthomonas_vasicola-YP_201580 ----------------SVRLDIRRigaikkgdeiig-NQt B Pseudomonas_aeruginosa-Q48F94 ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA_PSEFL ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA_PSEPK ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA_PSEPU ----------------SVRLDIRRtgavkegdevvg-sEt B Pseudomonas_aeruginosa-RECA_PSESM ----------------SVRLDIRRtgavkegdevvg-sEt ============================================================================ B DEINOCOCCUS_RADIODURANS ----------------SVRLDVRKigqptkvgndavaNtv B Deinococcus_geothermalis ----------------SVRLDVRKigqpvklgndavgNtv B Thermus_aquaticus-RECA ----------------SVRLDVRKsgqpikvgneavgiKv B Thermus_aquaticus-RECA_THET2 ----------------SVRLDVRKsgqpikvgneavgvKv B Thermus_aquaticus-RECA_THET8 ----------------SVRLDVRKsgqpikvgneavgvKv B Thermus_aquaticus-RECA_THETH ----------------SVRLDVRKsgqpikvgneavgvKv ============================================================================ Consensus xxxxxxxxxxxxxxxxSlRLnLKKxqxxxxxxxxxxxdqr

Page 14 of 20

This webpage, and all other files in or under this directory (except for those explicitly copyrighted or licensed otherwise), are licensed (copyright 2001-2008) by Allen Smith under a Creative Commons Attribution-ShareAlike 2.5 License; also available is a text version of the Legal Code of the license. (Of course, factual material is not copyrightable - fortunately!)