690       700       710       720
                                    ----:----|----:----|----:----|----:----|
  Consensus                         xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
============================================================================
A PYROCOCCUS_FURIOSUS               ----------------------------------------
A Archaeoglobus_fulgidus            ----------------------------------------
A Pyrococcus_abyssi                 ----------------------------------------
============================================================================
A METHANOCOCCUS_VOLTAE              ----------------------------------------
A Methanococcus_jannaschii          ----------------------------------------
A Methanococcus_maripaludis         ----------------------------------------
============================================================================
A SULFOLOBUS_SOLFATARICUS           ----------------------------------------
A Desulfurococcus_amylolyticus      ----------------------------------------
A Sulfolobus_acidocaldarius         ----------------------------------------
A Sulfolobus_tokodaii               ----------------------------------------
A Aeropyrum_pernix-RADA             ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH1     ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH2     ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_OH3     ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB1     ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB2     ----------------------------------------
A Aeropyrum_pernix-RADA_VAR_TB6     ----------------------------------------
============================================================================
* HUMAN                             ----------------------------------------
* S_CEREVISIAE                      ----------------------------------------
* Apis_mellifera                    ----------------------------------------
* Aspergillus_flavus                ----------------------------------------
* Aspergillus_fumigatus             ----------------------------------------
* Bovine                            ----------------------------------------
* C_elegans                         ----------------------------------------
* Candida_albicans                  ----------------------------------------
* Candida_glabrata                  ----------------------------------------
* Canis_lupus                       ----------------------------------------
* Chaetomium_globosum               ----------------------------------------
* Coccidioides_immitis              ----------------------------------------
* Coprinus_cinereus                 ----------------------------------------
* Cricetulus_griseus                ----------------------------------------
* Cryptococcus_neoformans           ----------------------------------------
* Danio_rerio                       ----------------------------------------
* Debaryomyces_hansenii             ----------------------------------------
* D_melanogaster                    ----------------------------------------
* D_pseudoobscura                   ----------------------------------------
* Emericella_nidulans               ----------------------------------------
* Encephalitozoon_cuniculi          ----------------------------------------
* Eremothecium_gossypii             ----------------------------------------
* Chicken                           ----------------------------------------
* Gibberella_zeae                   ----------------------------------------
* Kluyveromyces_lactis              ----------------------------------------
* Mouse                             ----------------------------------------
* Neurospora_crassa                 ----------------------------------------
* Rabbit                            ----------------------------------------
* Pichia_angusta                    ----------------------------------------
* Rat                               ----------------------------------------
* Schizosaccharomyces_pombe         ----------------------------------------
* Strongylocentrotus_purpuratus     ----------------------------------------
* Tetraodon_nigroviridis            ----------------------------------------
* Tribolium_castaneum               ----------------------------------------
* Ustilago_maydis                   ----------------------------------------
* X_tropicalis                      ----------------------------------------
* Yarrowia_lipolytica               ----------------------------------------
* X_laevis-RA51A                    ----------------------------------------
* X_laevis-RA51B                    ----------------------------------------
  Cryptosporidium_hominis           ----------------------------------------
  Cryptosporidium_parvum            ----------------------------------------
  Dictyostelium_discoideum          ----------------------------------------
  Entamoeba_histolytica             ----------------------------------------
  Leishmania_donovani               ----------------------------------------
  Leishmania_tropica                ----------------------------------------
  Plasmodium_berghei                ----------------------------------------
  Plasmodium_falciparum             ----------------------------------------
  Tetrahymena_thermophila           ----------------------------------------
  Theileria_annulata                ----------------------------------------
  Theileria_parva                   ----------------------------------------
  Trypanosoma_brucei                ----------------------------------------
  Trypanosoma_cruzi                 ----------------------------------------
P Arabidopsis_thaliana              ----------------------------------------
P Oryza_sativa                      ----------------------------------------
P Maize-R51A1                       ----------------------------------------
P Maize-R51A2                       ----------------------------------------
============================================================================
B E_COLI                            ------p---n--s---t---p----dfsv---d---d--
B MYCOBACTERIUM_SMEGMATIS           -----------------i---g----avvt---a---e--
B MYCOBACTERIUM_TUBERCULOSIS        ------a---v--v---t---d----dxs----d---d--
B Acinetobacter_calcoaceticus       ------a---s--d---q---t----a-ah---d---e--
B Actinobacillus_pleuropneumoniae   ------p---e--k---t---sag--eqnv---l---d--
B Actinobacillus_succinogenes       ------p---e--k---t---l----iael---d---g--
B Actinomyces_bovis                 -----------------i---g----adlt---a---e--
B Azotobacter_vinelandii            ------p---a--s---a---r----paal---a---d--
B Bacillus_clausii                  ------a---k--l---e---e----aae----e---q--
B Bacillus_halodurans               ------e---i--e---v---e----aps----e---e--
B Bacillus_licheniformis            -----------------l-dtg----gaap---a---q--
B Bacillus_megaterium               ------q---d--g---e---p----ape----d---d--
B Bacillus_subtilis                 ------n---n--g---v---v----qqqa---e---e--
B Bordetella_pertussis              ------a---a--t---f---p----asea---e---d--
B Burkholderia_fungorum             ------v---n--a---m---a----eaat---v---a--
B Chromobacterium_violaceum         ------i---e--i---n---e----nqg----d---e--
B Clostridium_acetobutylicum        ------k---v--k---n---e----kpk----i---e--
B Clostridium_thermocellum          ------f---l--m---s---i----naqv---d---t--
B Colwellia_psychrerythraea         --------------------------tvva---e---d--
B Corynebacterium_efficiens         ------a---q--t---a---d----elt----d---d--
B Desulfotalea_psychrophila         -----------------l---p----dree---t---k--
B Enterococcus_faecalis             -----------------igedg----stit---e---e--
B Haemophilus_ducreyi               ------p---d--q---p---asekleldv---n---d--
B Haemophilus_influenzae            ------p---e--q---a---l----madi---e---q--
B Histophilus_somni                 ------p---e--k---a-lla----dlea---e---s--
B Kineococcus_radiotolerans         ------a---r--l---d---a----paev---d---v--
B Leifsonia_xyli                    -----------------i---v----adpn---a---d--
B Mannheimia_succiniciproducens     ------p---e--q---a----------ll---a---d--
B Nitrosomonas_europaea             -------------a---a---v----glae---t---d--
B Nitrosomonas_eutropha             ------a---v--d---l---a----etn----n---r--
B Oceanobacillus_iheyensis          ------k------v---d---e----dkt----e---e--
B Pasteurella_multocida             ------p---e--k---v---l----aadi--ae---k--
B Photobacterium_profundum          ------a---v--e---e---v----eetd---a---k--
B Photorhabdus_luminescens          ------a---gefn---s---a----asdy---e---d--
B Proteus_mirabilis                 ------ageft--s---a---a----dfag---e---e--
B Pseudomonas_cepacia               ------v---v--a---m---p----dgag---n---e--
B Pseudomonas_pseudomallei          ------v---a--a---m---p----qgag---s---e--
B Shewanella_amazonensis            -----------------s---h----ssss---g---s--
B Shewanella_putrefaciens           ------s---a--l---a---s----sas----d---d--
B Streptomyces_avermitilis          aavtsaa---a--a---t---d----dta----k---t--
B Vibrio_alginolyticus              ------a---l--a--------------ea---p---e--
B Vibrio_angustum                   ------p---v--t---e---g----d-qv---d---e--
B Vibrio_cholerae                   ------e---n--mqlia---e----tssa---a---d--
B Vibrio_fischeri                   ------a---e--e---k---p----e------t---d--
B Vibrio_parahaemolyticus           ------p------a---q---p----eapa---a---g--
B Vibrio_splendidus                 -----------------t---p----avle---e---k--
B Vibrio_vulnificus                 ------p---a--n---i---n----desa---e---l--
B Yersinia_enterocolitica           ------g---n--g---e---q----pvvt---a---t--
B Cupriavidus_metallidurans-Q1LR74  ------p---l--n---t---v----agap---a---e--
B Cupriavidus_metallidurans-RECA    ------p---l--n---t---v----agap---a---e--
B Erwinia_carotovora-RECA           -----------------a---g----efts---a---a--
B Erwinia_carotovora-RECA_ERWCT     -----------------g---n----elkp---a---a--
B Listeria_monocytogenes-RECA       -----------------i---d----gsskepld---e--
B Listeria_monocytogenes-RECA_LISMF -----------------i---d----gsnkepld---e--
B Neisseria_gonorrhoeae-RECA        ------m---h--i---t--------egtq---d---e--
B Neisseria_gonorrhoeae-RECA_VAR    ------m---h--i---t--------egtq---d---e--
B Salmonella_typhi-RECA             ------q---n--a---t---p----dfav---d---d--
B Salmonella_typhi-RECA_SALPA       ------q---n--a---t---p----dfav---d---d--
B Streptomyces_coelicolor-RECA      ------v---h--p---e---e----sat----epgad--
B Streptomyces_coelicolor-RECA_STRL ------v---h--p---e---e----sat----epgad--
B Xylella_fastidiosa-RECA           ------e---l--s---r---e----egde---d---t--
B Xylella_fastidiosa-RECA_XYLFT     ------e---l--s---r---e----egde---d---t--
B Yersinia_pestis-RECA              ------g---n--g---e---q----pvaa---a---t--
B Yersinia_pestis-RECA_YERPS        ------g---n--g---e---q----pvaa---a---t--
B Mycobacterium_tuberculosis-RECA   ------a---v--v---t---d----dps----n---d--
B Mycobacterium_tuberculosis-RECA_M ------a---v--v---t---d----dls----d---d--
B Neisseria_meningitidis-RECA       ------m---h--i---t--------egtq---d---e--
B Neisseria_meningitidis-RECA_NEIMA ------m---h--i---t--------egtq---d---e--
B Neisseria_meningitidis-RECA_VAR   ------m---h--i---t--------egtq---d---e--
B Xanthomonas_vasicola-RECA_XANAC   -----------------p---a----eapr---e---a--
B Xanthomonas_vasicola-RECA_XANCP   -----------------p---a----eapr---e---a--
B Xanthomonas_vasicola-YP_201580    -----------------p---a----eapr---e---a--
B Pseudomonas_aeruginosa-Q48F94     ------g---v--d---t---k----avgs---r---eaa
B Pseudomonas_aeruginosa-RECA       ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEF5 ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEFL ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPK ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSEPU ----------------------------------------
B Pseudomonas_aeruginosa-RECA_PSESM ----------------------------------------
============================================================================
B DEINOCOCCUS_RADIODURANS           ------nageap---------------ala---p---a--
B Deinococcus_geothermalis          -------egrdp----------------ia---a---v--
B Thermus_aquaticus-RECA            ------eradkv---------------vla----------
B Thermus_aquaticus-RECA_THET2      ------eragev---------------vla----------
B Thermus_aquaticus-RECA_THET8      ------ersdqv---------------vla----------
B Thermus_aquaticus-RECA_THETH      ------ersdqv---------------vla----------
============================================================================
  Consensus                         xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx