TATA-Binding Protein (TBP or TF2D)

                                  200       210       220       230       240       250       260
                                ----|----:----|----:----|----:----|----:----|----:----|----:----|
  Consensus                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU                         -----------------------------------------------------------------
A Pyrococcus_abyssi             -----------------------------------------------------------------
=================================================================================================
* HUMAN                         --qqqavaaaavqq-----s---tsqq-----at-q-gtsg---------q--ap-----ql-fh
* S_CEREVISIAE                  --ankivfdpntrq-----v---wenq-----nr-d-gt-----------k--pa-----tt-fq
P ARABIDOPSIS_THALIANA          -----------------------------------------------------------------
* 1JFIC_Human                   -----------------------------------------------------------------
* 1TBPA_S_cerevisiae            -----------------------------------------------------------------
* Anopheles_gambiae             --tpmgglsssnyt-----m---paig-----st-s-gksm---------htyap-----sf-st
* Apis_mellifera                qlqqlhtmspniqsgmlmig---tpqknmhayat-t-ptfa---------t--pq-----sl-mq
* Aspergillus_flavus            -----------------------------------------------------------------
* Aspergillus_fumigatus         -----------------------------------------------------------------
* Bovine                        --qqqqaavaavqq-----s---tsqq-----at-q-gpsg---------q--tp-----ql-fh
* C_briggsae                    --mhshlansalnl-----n---inpa-----svgp-gnpgsvlhhnmdin--pp-----svayq
* C_elegans                     --mhshlansnlnl-----n---inpa-----sv-g-pdrn---------p--gs-----vm-hh
* Candida_albicans              --tnpqqaktfmks-----i---eede-----kn-k-ae-----------d--ld-----ii-kk
* Candida_glabrata              --ankavfdpntrq-----v---wenq-----vn-k-te-----------d--da-----vk-pe
* Canis_lupus                   -----------------------------------------------------------------
* Cryptococcus_neoformans       ---------sglal-----p---kasn-----ag-p-ssss---------s--kp-----eg-iq
* Danio_rerio                   -----------------------------------------------------------------
* Debaryomyces_hansenii         --qakaftapnsll-----fplgidgq-----rt-d-in-----------q--ea-----tp-kk
* D_melanogaster                -----------------------------------------------------------------
* Emericella_nidulans           --lsfpggtafpgg-----a---dltp-----ps-d-kdan---------m--at-----ng-qs
* Encephalitozoon_cuniculi      -----------------------------------------------------------------
* Eremothecium_gossypii         --qnkivfdhstrs-----v---wenq-----dk-d-ss-----------m--gh-----lm-gg
* Chicken                       --qrqqqqqqaaqs-----s---tsqq-----at-q-gtsg---------q--tp-----ql-fh
* Gibberella_zeae               -----------------------------------------------------------------
* Kluyveromyces_lactis          --enkivfdpstrs-----v---wetq-----ek-q-e--------------------------h
* Macaca_mulatta                --qqqavaaaavqq-----s---tsqq-----tt-q-gtsg---------q--ap-----ql-fh
* Mesocricetus_auratus          --qavataaasvqq-----s---tsqq-----st-q-gasg---------q--tp-----ql-fh
* Mouse                         --qavataaasvqq-----s---tsqq-----pt-q-gasg---------q--tp-----ql-fh
* Neurospora_crassa             --aaqakaftapgs-----l---sfpg-----aa-g-eltp---------p--ts-----ta-ns
* Onchocerca_volvulus           -----------------------------------------------------------------
* Petromyzon_marinus            --tpqpvqgssmgm-----a---ddqq-----qp-qagtsq---------q--etgasqmqv-yq
* Pneumocystis_carinii          --------------------------------ap-s-slsf---------p--ss-----hi-lm
* Rat                           --qavataaasvqq-----s---tsqq-----pt-q-gasg---------q--tp-----ql-fh
* Schizosaccharomyces_pombe     -------------------------df-----al-p-ttas---------q--as-----af-mn
* Strongylocentrotus_purpuratus --qrshypqissqq-----s---qsyl-----sv-p-si-g------------tp-----s--fg
* Tetraodon_nigroviridis        --eldlsflpdelg-----t---qeep-----sr-h-nd-----------t--aq-----te-aq
* Tribolium_castaneum           --qsqqvpplapmg-----a---ltpt-----lg-l-gmgm---------s--mp-----htkya
* Ustilago_maydis               -----------------------------------------------------------------
* X_laevis                      -----------------------------------------------------------------
* X_tropicalis                  --eeqqrqqqqaqq-----s---tsqq-----gn-q-g-sg---------q--tp-----ql-fh
* Yarrowia_lipolytica           --alsaptnpaqaq-----q---fvtq-----n--n-ls-----------f--pq-----da--e
  Dictyostelium_discoideum      -----------------------------------------------------------------
  Tetrahymena_thermophila       -----------------------------------------------------------------
P Glycine_max                   -----------------------------------------------------------------
P Oryza_sativa                  -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2     -----------------------------------------------------------------
P Maize-TBP1                    -----------------------------------------------------------------
P Maize-TBP1_VAR                -----------------------------------------------------------------
P Maize-TBP2                    -----------------------------------------------------------------
=================================================================================================
  Consensus                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Page 4 of 10


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