TATA-Binding Protein (TBP or TF2D)

                                       400       410       420       430       440       450
                                ----:----|----:----|----:----|----:----|----:----|----:----|----:
  Consensus                     xxnxxxgivxxxxxxxxxxxxxxxPxLQNIVsTVNLxckLDLKtIALhARNAEYNPKxxxxxxRF
=================================================================================================
A PYRFU                         dmS---kVk---------------lrIENIVaSVDLfaQLDLEkVldlcpNsKYNPE------eF
A Pyrococcus_abyssi             dtN---nVk---------------lrIENIVaSVDLfaQLDLEkVldicpNsKYNPE------eF
=================================================================================================
* HUMAN                         esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* S_CEREVISIAE                  --S---GIV---------------PtLQNIVaTVtLgCRLDLKTVALHARNAEYNPK------RF
P ARABIDOPSIS_THALIANA          --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
* 1JFIC_Human                   --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* 1TBPA_S_cerevisiae            --m---GIV---------------PtLQNIVaTVtLgCRLDLKTVALHARNAEYNPK------RF
* Anopheles_gambiae             pse--paIL---------------PqLQNIVSTVNLsCKLDLKkIALHARNAEYNPK------RF
* Apis_mellifera                adp---GIL---------------PqLQNIVSTVNLnCKLDLKkIALHARNAEYNPK------RF
* Aspergillus_flavus            --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Aspergillus_fumigatus         --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Bovine                        esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* C_briggsae                    qlD---ipM---------------PaLQNIVSTVNLgvpLDLKkIALHARNAEYNPK------RF
* C_elegans                     qlD---ipM---------------PaLQNIVSTVNLgvQLDLKkIALHARNAEYNPK------RF
* Candida_albicans              --i---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Candida_glabrata              --S---GIV---------------PtLQNIVaTVNLgCRLDLKTVALHARNAEYNPK------RF
* Canis_lupus                   --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Cryptococcus_neoformans       avD---GLV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPR------RF
* Danio_rerio                   --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Debaryomyces_hansenii         --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* D_melanogaster                --SadpGIV---------------PqLQNIVSTVNLcCKLDLKkIALHARNAEYNPK------RF
* Emericella_nidulans           pgS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Encephalitozoon_cuniculi      --S---GII---------------PtLQNVVaTVNLsCKLDLKnIALrARNAEYNPK------RF
* Eremothecium_gossypii         --S---GIV---------------PtLQNIVaTVNLdCRLDLKTVALHARNAEYNPK------RF
* Chicken                       esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Gibberella_zeae               --S---GIt---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPKvhqtlrRF
* Kluyveromyces_lactis          atS---GII---------------PtLQNIVaTVNLdCRLDLKTVALHARNAEYNPK------RF
* Macaca_mulatta                esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Mesocricetus_auratus          esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Mouse                         esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Neurospora_crassa             ptS---GMt---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Onchocerca_volvulus           ------------------------PaLQNIVSTVNLgvpLDLKkIALHARNAEYNPK------RF
* Petromyzon_marinus            esS---GIV---------------PqLQNIVSTVNLcCKLDLKkIALHARNAEYNPK------RF
* Pneumocystis_carinii          -vS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Rat                           esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Schizosaccharomyces_pombe     gvS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Strongylocentrotus_purpuratus esS---GIV---------------PqLQNIVSTVNLnCRLDLKkIALHARNAEYNPK------RF
* Tetraodon_nigroviridis        --S---GII---------------PqLQNIVSTVNLgCpLDLKfIALqARNAEYNPK------RF
* Tribolium_castaneum           adp---nIV---------------PqLQNIVSTVNLsCKLDLKkIALHARNAEYNPK------RF
* Ustilago_maydis               ------GIV---------------PtLQNIVaTVNLevRLDLKTIALHARNAEYNPK------RF
* X_laevis                      --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* X_tropicalis                  esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Yarrowia_lipolytica           --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
  Dictyostelium_discoideum      --S---GII---------------PtLQNIVSTVNMatELyLKaIALgARNAEYNPK------RF
  Tetrahymena_thermophila       --N---nILstietmdksisedlyPkLQNIVSTVNLstKLDLKqIALrARNAEYNPK------RF
P Glycine_max                   --S---GIV---------------PtLQNIVSTVNLdCKLDLKTIALqARNAEYNPK------RF
P Oryza_sativa                  --S---GII---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Arabidopsis_thaliana-TBP2     --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP1                    --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP1_VAR                --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP2                    --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
=================================================================================================
  Consensus                     xxnxxxgivxxxxxxxxxxxxxxxPxLQNIVsTVNLxckLDLKtIALhARNAEYNPKxxxxxxRF

Page 7 of 10


This webpage, and all other files in or under this directory (except for those explicitly copyrighted or licensed otherwise), are licensed (copyright 2001-2008) by Allen Smith under a Creative Commons Attribution-ShareAlike 2.5 License; also available is a text version of the Legal Code of the license. (Of course, factual material is not copyrightable - fortunately!)