Rad51/RadA/RecA

                                         550       560       570       580
                                  ----:----|----:----|----:----|----:----|----:
Consensus                         xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxixxxxxsxr
===============================================================================
PYROCOCCUS_FURIOSUS               aphlp-egeavfsit-ekgied-----------------------
Pyrococcus_abyssi                 aphlp-egeavfrit-ekgied-----------------------
===============================================================================
METHANOCOCCUS_VOLTAE              aklydsphlp-daeaifrit-ekgiqd------------------
Methanococcus_jannaschii          aklydsphlp-daeamfrit-ekgihd------------------
===============================================================================
SULFOLOBUS_SOLFATARICUS           vvdaphlp-egevvfalt-eegird--ae----------------
Aeropyrum_pernix                  vvdaphlp-egetvfait-ewgird--pe----------------
Desulfurococcus_amylolyticus      vvdaphlp-egevvfvit-eegird--se----------------
Sulfolobus_tokodaii               ivdaphlp-egevvfait-eegvrd--ae----------------
===============================================================================
HUMAN                             ---------------------m--faadpkkpiggnIiahasTtR
YEAST                             ---------------------a--fnpdpkkptggnImahssTtR
Apis_mellifera                    ---------------------s-mfggdqkkpigghIiahasTtR
Aspergillus_fumigatus             ---------------------m--fnpdpkkpiggnIiahasTtR
Bombyx_mandarina                  ---------------------v--fnadtkkpigghIiahasTtR
Bos_taurus                        ---------------------m--faadpkkpiggnIiahasTtR
Caenorhabditis_elegans            ---------------------m--fqadakkpigghIiahmsTtR
Candida_albicans                  ---------------------m--fnpdpkkpiggnIiahssTtR
Candida_glabrata                  ---------------------s--fnpdpkkpiggnImahssTtR
Canis_lupus                       ---------------------m--faadpkkpiggnIiahasTtR
Coprinus_cinereus                 ---------------------p--yagnekkpiggnImahasTtR
Cricetulus_griseus                ---------------------m--ftadpkkpiggnIiahasTtR
Cryptococcus_neoformans           ---------------------f--avadakkpiggnImahasTtR
Danio_rerio                       ---------------------m--fsadpkkpiggnIlahasTtR
Debaryomyces_hansenii             ---------------------m--fnpdpkkpiggnIiahssTtR
Drosophila_melanogaster           ---------------------g--mf-dakkpigghImahssTtR
Drosophila_pseudoobscura          ---------------------m--fvadakkpvgghIlahasTtR
Emericella_nidulans               ---------------------m--fnpdpkkpiggnIiahasTtR
Encephalitozoon_cuniculi          ---------------------m--ftgdikkpiggnImahasTtR
Eremothecium_gossypii             ---------------------m--fnpdpkkpiggnImahssTtR
Gallus_gallus                     ---------------------m--faadpkkpiggnIiahasTtR
Gibberella_zeae                   ---------------------m--fnpdpkkpiggnIiahasTtR
Kluyveromyces_lactis              ---------------------m--fnpdpkkpiggnImahssTtR
Mus_musculus                      ---------------------m--faadpkkpiggnIiahasTtR
Neurospora_crassa                 ---------------------m--fnpdpkkpiggnIiahasTtR
Nosema_bombycis                   ---------------------m--fagdvkkpiggnImahasTtR
Oikopleura_dioica                 ---------------------m--mmgdnqtpvggnIlahasctR
Oryctolagus_cuniculus             ---------------------m--faadpkkpiggnIiahasTtR
Pichia_angusta                    ---------------------i--fnpdpkkpiggnIvahssTtR
Pleurotus_ostreatus               ---------------------gp-yagnekkpiggnImahasTtR
Rattus_norvegicus                 ---------------------m--faadpkkpiggnIiahasTtR
Schizosaccharomyces_pombe         ------------------------fnpdpkkpiggnIlahssTtR
Strongylocentrotus_purpuratus     ---------------------m--ftsdpkkpigghImahasTtR
Tetraodon_nigroviridis            ---------------------k--tcgygiteetsefvqlvlfav
Ustilago_maydis                   ---------------------a--ftadakkpiggnIvahasTtR
Xenopus_laevis                    ---------------------m--faadpkkpiggnIiahasTtR
Xenopus_tropicalis                ---------------------m--faadpkkpiggnIiahasTtR
Yarrowia_lipolytica               ------------------------fnpdpkkpiggnIvahasTtR
Cryptosporidium_spp               ---------------------a--mfqndkvpiggnIiahasqtR
Dictyostelium_discoideum          ---------------------m--fnpdpkkpigghImahssTtR
Entamoeba_histolytica             ---------------------m--fggdtkkpvggnIiahasTtR
Leishmania_donovani               ---------------------m--fqadskkpigghImahasTtR
Leishmania_tropica                ----------------q----m--fqadskkpigghImahasTtR
Plasmodium_berghei                ---------------------m--fgghekipiggnIiahasqtR
Plasmodium_falciparum             ---------------------m--fgghekipiggnIiahasqtR
Plasmodium_yoelii                 ---------------------m--fgghekipiggnIiahasqtR
Tetrahymena_thermophila           ---------------------m--fagdmkkpiggnImahasTtR
Theileria_annulata                lllyiiiycyilinickfyidk--fvgndklpvgghIiahasqtR
Theileria_parva                   ---------------------t--ffgndklpvgghIiahasqtR
Trypanosoma_brucei                ---------------------t--fqadskkpigghImahasTtR
Trypanosoma_cruzi                 ----------------q----m--fqadakkpigghImahasTtR
Arabidopsis_thaliana              ---------------------l--fagpqfkpiggnImahatTtR
Oryza_sativa                      ---------------------m--fagpqikpiggnImahasTtR
Zea_mays                          ---------------------m--fagpqikpiggnImahasTtR
===============================================================================
ECOLI                             ggnalkfya---------------------------------SvR
MYCOBACTERIUM_SMEGMATIS           ggkalkfya---------------------------------SvR
MYCOBACTERIUM_TUBERCULOSIS        ggkalkfya---------------------------------SvR
Acetobacter_polyoxogenes          ggnalkfya---------------------------------SvR
Acinetobacter_calcoaceticus       ggnalkfya---------------------------------SvR
Actinobacillus_pleuropneumoniae   ggnalkfya---------------------------------SvR
Actinobacillus_succinogenes       ggnalkfys---------------------------------SvR
Bacillus_licheniformis            ggralkfys---------------------------------SvR
Bacillus_subtilis                 ggralkfys---------------------------------SvR
Burkholderia_fungorum             ggnalkfya---------------------------------SvR
Carboxydothermus_hydrogenoformans ggralkfya---------------------------------SiR
Chromobacterium_violaceum         ggnalkfya---------------------------------SvR
Clostridium_thermocellum          ggralkfya---------------------------------SvR
Colwellia_psychrerythraea         ggnalkfya---------------------------------SvR
Desulfotalea_psychrophila         ggnalkfyc---------------------------------SeR
Enterococcus_faecalis             ggralkfya---------------------------------TvR
Erwinia_carotovora                ggnalkfya---------------------------------SvR
Haemophilus_ducreyi               ggnalkfya---------------------------------SvR
Haemophilus_influenzae            ggnalkfys---------------------------------SvR
Histophilus_somni                 ggnalkfya---------------------------------SvR
Kineococcus_radiotolerans         ggkalkfya---------------------------------SvR
Leifsonia_xyli                    ggkalkfya---------------------------------SvR
Listeria_monocytogenes            ggralkfys---------------------------------TvR
Mannheimia_succiniciproducens     ggnalkfys---------------------------------SvR
Neisseria_gonorrhoeae             ggnalkfys---------------------------------SvR
Nitrosomonas_europaea             ggnalkfya---------------------------------SvR
Nitrosomonas_eutropha             ggnalkfya---------------------------------SvR
Oceanobacillus_iheyensis          ggralkfys---------------------------------SvR
Pasteurella_multocida             ggnalkfya---------------------------------SvR
Photobacterium_profundum          ggnalkfya---------------------------------SvR
Photorhabdus_luminescens          ggnalkfya---------------------------------SvR
Proteus_mirabilis                 ggnalkfya---------------------------------SvR
Pseudomonas_aeruginosa            ggnalkfya---------------------------------SvR
Pseudomonas_cepacia               ggnalkfys---------------------------------SvR
Salmonella_typhi                  ggnalkfya---------------------------------SvR
Shewanella_putrefaciens           ggnalkfya---------------------------------SvR
Streptomyces_avermitilis          ggralkfya---------------------------------SvR
Streptomyces_coelicolor           ggralkfya---------------------------------SvR
Streptomyces_lividans             ggralkfya---------------------------------SvR
Vibrio_cholerae                   ggnalkfya---------------------------------SvR
Vibrio_splendidus                 ggnalkfya---------------------------------SvR
Vibrio_vulnificus                 ggnalkfya---------------------------------SvR
Xanthomonas_vasicola              ggnalkfya---------------------------------SvR
Xylella_fastidiosa                ggnalkfya---------------------------------SvR
Yersinia_pestis                   ggnalkfya---------------------------------SvR
===============================================================================
DEINOCOCCUS_RADIODURANS           --kiktvknkvaapfkevelalvygkgfdq-lsd-lVglaadmdi
Deinococcus_geothermalis          --kvktvknkvappfkeveltllygkgfdq-lsd-lVtlaadmdi
Thermus_aquaticus                 --kvkvvknklappfreaeleiyfgrgldp-vmd-lVnvavaagv
===============================================================================
Consensus                         xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxixxxxxsxr

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